AMCG00013331


Basic Information

Item Value
gene id AMCG00013331
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28492946 ~ 28495999 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013331
CGCATACTTCCTCCAGACCGAACTGGAGGCGGGGCTGTTGAACAGAGAGCTCATATCAAAAGTAATGAACATAGTCTTAGTCTTACTACAGTTGTACTTGTATCACATTAAACGGTGACCAAAATtatattaagtgtttttaaacattctttAGAGGGTGAATTCCTCAATGAGgcctttcatttgtatttgaaatgtgctTGTTACATCATCACAGATTGCTTCCAGCGGAGGAGGGTCAGTAAAATATTCGTTGTTGGCTTCATTACTCTTTGAAAACAGCTGGACAGCTCCCCGCAAACCATGAGGGGCTTTCATTCCATGTTTTGGATGTCTTTCGTGGCAGCACTGGTATTTGagCCCAGTGTGTTTTCAGCTCCACGGGATGTCGTGTACCTGGAGAGTCGAGAAGGGGGCTCTGTAGTGCTCCACTTCGTGTCCCAGAACGGAAATGATTCTCCAACAGGATTCTACCTGAGGAGAAAACACCCCGGACCTGTGTTTGAAATGCTGTTTCTGGACGCAGACACCGCCGATTCAACTGTCGAATCCTGGTACAGCGGTCGCCTTAAGATCGCTGGGAAGCTGAGCTCAAACAAACTCAACGTGACCATTTCTGATCTCAGGCACAACGACTCTGGGTTGTATGTCTGTGACTTCCTCTATGAAGCCGTTACCCACTACAGAAATGTCTCCGGAAAAAAcgactttgttgtttttgtaaaaagaaCAGAGAACCTGCGCTGCTCCAGTTACCCGACCTTGTTGTTCTCCATATCCGGAGCCGTGGGCCTGCTGTTGGTCATCGTGGTCGTGCTGTGTACCATTCAGTGTACCAAGTTGTGGTGCAAGGCAAAACCAAAAGCCAACGATGTCGTGTATGAAGACATGGGCCGCTTGCAGCCAGCCGGAAAGCGAATTCCTCACGGTTTCGCTGAACTGTCGCACCTGGAGGAAAAGGAAACCTCAGCACCCCTCAACAACACGTACGAGTCTCACTACAACAACCTGATCACCGGCACCCCCTCCCTGTAACTCGAGACCCTACAGGAGGGCGACAAAGGACAAACGGACGGACTATAGGGAAGACACCTGCATCTCACCAGTCGATTACACAGACCACCAGCTGAGGGAAATCTGCTTTCCTCTGCCACCCATCACAGAGAACGGAGGCCCTTTGACCACTTGACTCTGACACAGGTCCTTTCTCTCCAGGCCAGCACTGGCCAAATAATCACACAGACAGACGTGTGTGATCTGAGTGACATTAATGCTTGTAATACTGAGAGCGGTTTAGTGTTTATATCCAGTTATTGCGCTCTATGAGAACGTTAACGTCAACGATAGGTTTCCCAGATTAACTGATTAATGctaatgcaaattacaaacttaaaTGGACTTCAAAAAGCCCAATTAACATGTACATTCATGCTTATTAATGCAATGCGGTTCGATGACTCTCAAATGTGTTAATAGAATGAATCccatgtatactgtatatttattaagcATTAATAAATGGTTGATTGTAGCGCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013331 True 1539 mRNA 0.46 4 28492946 28495999

Neighbor

gene id symbol gene type direction distance location
AMCG00013326 nup85,LOC106601803 coding downstream 274888 28210403 ~ 28218058 (-)
AMCG00013325 LOC107724659,LOC107579769 coding downstream 293153 28196957 ~ 28199793 (-)
AMCG00013319 mchr1,LOC103354888,LOC107580882 coding downstream 362814 28128668 ~ 28130132 (-)
AMCG00013318 NA coding downstream 414244 28074541 ~ 28078702 (-)
AMCG00013313 stx8 coding downstream 565619 27917922 ~ 27927327 (-)
AMCG00013332 NA coding upstream 6023 28502022 ~ 28521437 (-)
AMCG00013339 nptx1l,LOC107665615,LOC107569544,LOC106601408,LOC103375324 coding upstream 275934 28771933 ~ 28777474 (-)
AMCG00013348 prpsap1,LOC106606986,LOC106533983,LOC108255900,LOC105013149,LOC101163819 coding upstream 478691 28974690 ~ 28989005 (-)
AMCG00013349 LOC105417629 coding upstream 495438 28991437 ~ 28996380 (-)
AMCG00013347 aanat coding upstream 565889 29061888 ~ 29063240 (-)
G43691 NA non-coding downstream 1850 28488842 ~ 28491096 (-)
G43690 NA non-coding downstream 10891 28481732 ~ 28482055 (-)
G43689 LOC107601217,LOC107724432,LOC107698663,LOC107753100 non-coding downstream 12463 28480085 ~ 28480483 (-)
G43688 NA non-coding downstream 15438 28477155 ~ 28477508 (-)
G43687 NA non-coding downstream 16846 28475456 ~ 28476100 (-)
G43714 NA non-coding upstream 180825 28676824 ~ 28767352 (-)
G43724 NA non-coding upstream 220292 28716291 ~ 28717940 (-)
G43725 NA non-coding upstream 241958 28737957 ~ 28738773 (-)
G43834 znf207,LOC107753267 non-coding upstream 619223 29115222 ~ 29117961 (-)
G43831 NA non-coding upstream 623374 29119373 ~ 29121319 (-)
G43684 NA other downstream 25040 28467312 ~ 28467906 (-)
G43594 NA other downstream 420159 28068213 ~ 28072787 (-)
G43473 NA other downstream 923795 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 1199873 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 1935622 26553549 ~ 26557324 (-)
G43869 NA other upstream 757397 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 1430384 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 1544206 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 1584615 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 1669818 30165817 ~ 30184424 (-)

Expression


Co-expression Network