AMCG00013722


Basic Information

Item Value
gene id AMCG00013722
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39876427 ~ 39896462 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013722
ATGACGCTCTTGCAGCCGGTGTCATTGAAGACGTTGGCGATGCTGAAGGCTGCCAGCATCTCCAGGAAGCAGCGCACCGCCACCACCAGGAAGTTAACACTGGCCAGGTGCAGAACGATGGCGTCAGCTGGCAGCAGCTTACGGTCGCAGAGGGCCAAATGGCAGAATGCCCACATCACCAACAGGTTGCCTGGCACCCCCAGCAATGTCAGGAAGATGGAAGTGCGTCTTGTGCTGAAGGCAGCTGGCTTCATCTGTCTGGACGTGGTGGGCATCCCAGGGAACCTGACCGTGCTCCTGTTCTTCTACTACCTGCGTCTGTCTGAGGGCCGGCTTCTCCCCAACGACCTCATCCTGATCAAGCTGGCGTTTGTCAACCTGGTGGTGGTCCTGTGCCGTGGAATCCCACAGGCCTTAACTGCACTTGGCATCCGGAACCTCTTTGGGGACAATGGCTGCAAAGTGGTCATCTATATCTACCGTGTCAGCCGTGCCATGTCCATCTGTATCACCTCCCTCCTCAGCTGCTACCAATGCATAGTCATCGCCCCTGGATCAACCCGGTGGATGGTGCTGAAGCAGAGGGTCCCCAGAAGTATCCCCCTGATCATCTTGCTGCTATACGGAATGAACATTATAATATACCCCACTTCACTGCTCTTCACTTCAGCAGTTCCCAACTCCACCATCTCAGAGTACACCCTGAACATGGAGTTCTGCATTGTGGTGTTCCCTGGCTTTCAGACGTACATGGCCTGTGGAATGATTTACATACTTCGTGATTTAACCTTTATGGGCATCATGGTTAGTGCAGGCTTTTACATTGTCCTGATTCTGTACCGCCACAGGAAGCAGATGAGGGGCATGCATGGCTCAGACCAGAACCAGAGAAAAACAGTAGAGGCGTCCAAGTCAGTGCTCATGCTTGTGACTATGTATGCAATTCTGTTTGGCCTGGACAATGTCCTGTGGGTTTACACACTCTGTGTCACCCGTGTCCACCCTGCTGTCTCAGACACGCGGGTCTTTTTTGCCTCCTGCTACTCCGCCCTCAGCCCAGTCTTCATCATCGCTACCAACAAAAAGTTTGCAGCCAGACTGAACTGCTTTTCCCATGGCcgggaagaaaaaagtaatactaCAAAGATGGAAGTGCGTCTTGTGCTGAAGGCAGCTGGCTTCATCTGTCTGGACGTGGTGGGCATCCCAGGGAACCTGACCGTACTCCTGTTCTTCTGCTACCTGCGGCTGTCCGACGGCCACCTATCGCTCAATGACCTCATCCTGAGCAAGCTGGCGTTTGTCAACCTGGTGGTGGTCCTGTGCCGTGGAATCCCACAGGCCTTAACTGCACTTGGCATCCGGAACCTCTTTGGGGACAATGGCTGCAAAGTGGTCATCTATATCTACCGTGTCAGCCGTGCCATGTCCATCTGTATCACCTCCCTCCTCAGCTGCTACCAATGCATAGTCATCGCCCCTGGATCAAACTGGTGGATGGTGCTGAAGCAGAGGGTCCCCAGAAGCATCCCCCTGATCATCTTGCTGCTCTACGTAATTAACATTATAATATACcccactgcactgctctacacttCAGCAGTTCCCAACTCCACCATCCCAGAGTACACCCTGAACATGGAGTTCTGCATTGTGGTGTTCCCTGGTTTCAAGTCATACATGGCCAATGGAGTGATTTACATACTTCGTGATTTTGTCTTTGTGGGCATCATGGCTGGTGCAGGCTTCTACATTGTCCTGATTCTGTACCGCCACAGGAAGCAGATGAGGGGCATGCATGGCTCAGACCAGAACCAGAGAAAAACATCAGAGGCGTCAAAGTCATTGCTCATGCTTGTGGCCATGTATGTCATCCTGTTTGGCCTGGACAATGTAATGTGGGTTTACACCCTCTGTGTCACCCGTGTCCACCCTGCAGTCAATGATGCACGAGTCTTTTTTGCCTCCTGCTACTCCGCTCTCAGCCCAGTCTTCATCATCGCCACCAACAAAAAGTTTGCAGCCAGACTGAACTGCTTTTCCCATGGCCGGGAACCAAACAACAGGACTACAGTTACCACCGTCTCTCACTTACCCACAGGGTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013722 True 2109 mRNA 0.53 3 39876427 39896462

Neighbor

gene id symbol gene type direction distance location
AMCG00013716 NA coding downstream 20107 39855358 ~ 39856320 (-)
AMCG00013718 NA coding downstream 38119 39837346 ~ 39838308 (-)
AMCG00013715 NA coding downstream 41671 39761339 ~ 39834756 (-)
AMCG00013717 NA coding downstream 127377 39748091 ~ 39749050 (-)
AMCG00013713 NA coding downstream 163070 39703860 ~ 39713357 (-)
AMCG00013723 NA coding upstream 3642 39900104 ~ 39905668 (-)
AMCG00013733 NA coding upstream 744614 40641076 ~ 40647148 (-)
AMCG00013737 NA coding upstream 988492 40884954 ~ 40888451 (-)
AMCG00013738 NA coding upstream 993267 40889729 ~ 40927189 (-)
AMCG00013742 NA coding upstream 1096327 40992789 ~ 40995408 (-)
G46263 NA non-coding downstream 249237 39622363 ~ 39627190 (-)
G46245 NA non-coding downstream 314131 39562097 ~ 39562296 (-)
G46240 NA non-coding downstream 323182 39545571 ~ 39553245 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding downstream 346199 39528947 ~ 39530228 (-)
G46236 NA non-coding downstream 457688 39418491 ~ 39418739 (-)
G46368 NA non-coding upstream 485088 40381550 ~ 40381998 (-)
G46370 NA non-coding upstream 488887 40385349 ~ 40385758 (-)
G46372 NA non-coding upstream 520213 40416675 ~ 40418642 (-)
G46395 NA non-coding upstream 545848 40442310 ~ 40446394 (-)
G46419 NA non-coding upstream 696686 40593148 ~ 40593420 (-)
AMCG00013691 NA other downstream 904848 38942775 ~ 38971579 (-)
AMCG00013685 NA other downstream 1092994 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 1175353 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 1285225 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 1330392 38543850 ~ 38546035 (-)
G46333 NA other upstream 376929 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 489599 40386061 ~ 40428625 (-)
G46418 NA other upstream 690354 40586816 ~ 40587392 (-)
G46423 NA other upstream 707139 40603601 ~ 40608528 (-)
AMCG00013732 NA other upstream 721881 40618343 ~ 40637228 (-)

Expression


Co-expression Network