AMCG00013724


Basic Information

Item Value
gene id AMCG00013724
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39779219 ~ 39780190 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013724
ATGGATCTGCGGGAATTACTGAAGGCGATCATCACACTGGCCCAGAATACGATCGGTATCCCGGCCAACCTCGCCGTACTGCTGGTATTTGTCCACATCGCCCGGGCTGAGCGCCGGCTCCTGCCTGCCGACATCATCGTCTCCCAGCTGGTTTTCGTCAACCTGGTACTGATCCTGACCCGGGGCATCCCTCAGAGCCTCTCTGCGTTGGACTACAGAGGCTCCTATAACACGGCCACATGCAAATTCCTCATCTTCACCTACCGCACAACCCGTGCCATGTCCATCTGCCTTACCTTCCTGCTGAGCGCCTACCAGGGTGTCACCAtcgccccctcctcctcccgtcTGTACAGCCTGAAGCCTTGGCTCTCGCGCTGCCTGCTGCCCCTCAGCCTCCTCTTCTGGCTTCTAGATGGGGGTACTTCCTACTCCAGCATCCTCTACACCAACCAGATCCATAATGTCACGTTCAGTGCACTCACACTCAACCTGGGCTACTGCCTGGTTGAGTATCCTAGTGAGGAGTCCTACTTTGCCATCGGAGTCATGTACCTTGCCCGGGACACATGCTTCATCCTTCTCATGGTGCTCTCCAGCCTCTATATCCTGCTCATTCTCTACCAGCATCATCAGAGAGCGAAGGGAATCTGCAGCTCTGTCCAGAGTCAGGGCTCATCGGCCGAGAATCGGGCGGCTAAGACTGTGGTCACCCTGGTCACCCTGTACGTTGTGTTTTTCGGGATTGACAACCTGATTTGGGCGTACACTGTTACCATTGGGAAAGTGCCAGTGGTCATGAATGACGTGCGTGTTTTCTTCTCCACTCTCTATGCCACTGTCTGCCCGGTAGTTGTGATCGTGTCCAACAGGAAGGTGAACCGGAAGCTTCGCTGTGACAAGTTTGCACAAGACTCTCAGTCAAAAGAAACCACTATTTCCACTGTCTCGGTCAAGTTCCCCACATATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013724 True 972 mRNA 0.55 1 39779219 39780190

Neighbor

gene id symbol gene type direction distance location
AMCG00013721 NA coding upstream 165 39761180 ~ 39779054 (+)
AMCG00013719 NA coding upstream 24514 39753734 ~ 39754705 (+)
AMCG00013712 NA coding upstream 33696 39737727 ~ 39745523 (+)
AMCG00013711 NA coding upstream 47105 39716967 ~ 39732114 (+)
AMCG00013706 NA coding upstream 138451 39633191 ~ 39640768 (+)
AMCG00013720 NA coding downstream 9442 39789632 ~ 39897168 (+)
AMCG00013725 plxna2,LOC108425528,LOC103385266,LOC106567158,LOC107594012 coding downstream 331604 40111794 ~ 40120125 (+)
AMCG00013727 LOC106567158,LOC108425528,LOC103366170 coding downstream 403745 40183935 ~ 40271437 (+)
AMCG00013726 NA coding downstream 547708 40327898 ~ 40341318 (+)
AMCG00013728 NA coding downstream 665459 40445649 ~ 40467813 (+)
G46138 NA non-coding upstream 839708 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1157876 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1189060 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 1211900 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 1242161 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 611698 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 636442 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 1102659 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1422874 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1633170 41413360 ~ 41413600 (+)
G46244 NA other upstream 216919 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 957265 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1071865 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 1105748 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 1212938 38564489 ~ 38566281 (+)
G46345 NA other downstream 570462 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 597542 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2647911 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2864797 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2870000 42650190 ~ 42661844 (+)

Expression


Co-expression Network