AMCG00013726


Basic Information

Item Value
gene id AMCG00013726
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 40327898 ~ 40341318 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013726
TCTTTTTAGATGCTGTCATGTCCCAAGACCCCACTGAAACATCACCATCATTAAGCACAGCATCTCACATCTCCATTACAGTTCCAACAACAGCAGATTTAACATCAAAACCTGCTGGTACTACTGCGATTCCCGATACTACTTCTCAGAGTCTCGAGAAGACAACCGTTGCAGAGACCCTAAGCACAGAGGCAGTCACCACTAAAGCCCAAACTGCTGACACAACTACAACAGAGTCCAATCACACCACCGATGGAAGCAAAGCCAGTACGATGCCACCGAGTACCACCATAGCCACAACTCTCCTAAGCAGCACAGTGATCCATAGTATGACAGAAATAGATGCTCTTGGCAGCACCTCGGCCAATGTGCCCGACTCTGTGCCTTACATGCTGGGGATCCAGGAAGCAACCCCCAGATGGGGCAAACGTTCTCCAACCGTCCTGGTCTCCCTGCTACTGGCAGGATTGCTGCTGGCTGCCCTCCTCATCGGTGTCTACTGCTTCAAGACTCGACAGAACCACACCTCCAAGGGCATGAGACTGGCCGAGGAGCCCTACCAGACTGATGAGGAAAATCAGGGCAACACCCTGGTGTCTGTGGCCCCGCTGAACCCTCCAGAACCCCAGGAGAAACCGAGCATCAACGGGGAGTCTGCTGAAACAGTGAAGAGCCAGCCACCGCCGCATAGCACAGCTACGACCACAACCAACGGCCACTCGGCCAGCAAGCAAGCCCCAGTGGCTGACACAGAGCTGTAACTTGAATGTCATAAACAAACCAGCAAGGACAAACCAAAGACTGACACAAAGACCACAGACCAGAATCATCTTTGTATCTTTTATCTACTTTGTccgtttcatttcatttttccacTACTTTGCTCTTGCCTGCTGACGATTAACTTAATGAAAAGTGCAACAGACAGCAAtccacaataatacaaataataataatacaaataataataactaaattgTGAAGATAAAAGACTACATCAGCAGACAggttatcatttttaaatcaaccgTGGGTGAAAAACTGCTAATTGAGTTCAGAAGGCAAATCAGATAGACTGTCACTGGGAATTCACTATTAATGCtgtagttttttatttgaattattactTAATTATCCACTTACACATGCTTGAACAAAATATTTACTACATAATATATGGTTTAATTTCCATGTGCACTTGTTGGAAATTATAGCATCACAGCATTGCTCCGATGAATACAATACACACTTGCGGAAAATATCTAAACTGACTCATATTGGCAGGAAATCAAATTTATAATACATACTTTTGCCGCAGAAATAATGTTAATACTAATCTTACAGATAAACATACTAGATATTGTAGTGGAGATCTCAATGCCCATTTTTGTATCACTCCCTGTAGCCAGCTAAAAGCCAAAtgagaaattataataatggtaaataaatgtGCTTATTGTTGATTGTGAACCCTGAGCTATAATGTGCTGATGATACACAGTCTACTTACACACGCCCACAGTTCCTTCTCCCCTcgtttactgtattttatgttttgtttaaactcATGAAAAGTCCTGTACATTAAGACAACGTGATGGCTTGGGGAGTTAAGTTGCCAAATTTGACTGGGATGCACAATAAATGTTCCTCTAATGGTGCTTATCTTAGACATTTGACAAactggcacttagaagagggaaagcaaaaataattcTCCATTTCATTACCGCAAGCTTTACCAAGATCAGTGGAGGCCTGAGCTGACAAGCATCGGCTCCACTGTGAACCATACTGgggtctgttttatttttgttggtttcCTTTTTGCAGTGTCAACAGTTTCAGATGTTTAGCTGCAATGTCACTGCTGTGAAAATGGCCTAAGACACTTGTAGTGGAGTTACTAATGCTTTCGTCACACCATGTGcctatttctgttttttcagtattatgctttttgtttgttttgtgttttcaatttctGTAATGTTATAGTCActtctaatgtattttaatgtcttaTGAACGCAGCTTTTCTGTTTCAAACTACTGTAAATCTCTAAGCTCAAAGAAAGCCACAGATTAGCTAGATTAAggatttccttttgttttgtgtttgtttcttgagTCTTCAGAGACATTTTATTTGGAGGCCCTATGCAGAACGTGGATCTGCAAAGAGACCTGCATGaacctgttattttatttacacactgAGATTTCCAGGtgtccaaaataataatttggataTTGGAACTCTTTTGAAGCATTTATGAGTGCAGAGTTCTCTTCATTTTGCCATAAGAGGCATTCAACACCTACTGAACTAGCTAAATCTCCCCAGCCCACTTCAGTTAACCTCAGTTAATGTGAACATTCAGCTCACTCTTGGTAAATAAAGCAACAGGTTCATGCAGCACTGGTTTTAAACTGGAGGTTTGAAAATAACAATCCAATGTTGTTCTAGATTCTAAAACGTTTACAGAGCCccatcatattaaaatgagcacccCCCAGCAATGAAGAAGTTACTCTATTTTCCCATCATACCATTCCCCTGGTATATAAAATCATCCACCTTTATGGCTGTGTGCCTCAAGTCATGGATTACCAAGGCCAAATCAGAAGATGCTGATGGGTTTGTCTGCTCCATTTGATACCTGGTTTCTGGCTGCAGTTTTACCTTGACCCTATCAAGGCTGCTCATTTCAAAACTGCTGGGCTCTGACTTACAGTAGATGGTCATTTGAAATCCAAATGGCTTGTGGATTTGTTGATGATTTGAAAGGGATTGCCCCTccaaactttttattattattttgctttctttttacaAGTCATGATTAAAATCACCCCTTTGGTAATATACTCTTCTGTTCCTGGGCCAATGACAATCGCTTTGAGATGAATGAATTTTCAGGTTCTTAGGAGCCATTCCATTAAGTAGAATGCTAAAGCAAGTGTTTGCCAAttagtttcctttttaattcaCTAGCCGACTCGGTTAAACGGAGGCTCATACACAGACTGGGTCATAATGAATACATGGTCTTCAAACTGGTCTCCCACCTAGGCTTCACTTTCAgcttcttgttttattgtttgatcattttaatCTTATAAGGAGGTTTTAGTATTTCAATTTGGATTTGCCTGTGTCATTACAGATGCAGAAAAGCCAAGGTGCTTTTGATGTTATAAAACCTATTATTACATTATGATGATAAAGagataatgaagaaaaagattACTGCCCTAATTGTATGTGTCTGAAACTCCTCAGTtatgaatgttgtttttccatgtaACTGAAAAGGGAGGCGTATTCTAAGATACTGGATACAGGAATTAAGGTGTTAATGTTTTCAGTGATGCAagtcaattttacatttttgggcACACATGGGCTTTTctttttactatatatttttttttttacattccacAAGCAACTCTTAATTCTACTACCATTCAAGTCTATTAAAATGAAtcggcttttttatttttatttatgtttttattcaggGTAGGAATAAACATTGGAAATTAGTTTTGTATGAATACTGCTATTTCTCATAAATTTTGTATCTGTAAATAAGACAAATGCCTCCttcccatttaaaacaaaacttctgTATGCCTATAAATAGTGATTATTTGTTGAtgaacaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013726 True 3676 mRNA 0.39 4 40327898 40341318

Neighbor

gene id symbol gene type direction distance location
AMCG00013727 LOC106567158,LOC108425528,LOC103366170 coding upstream 56461 40183935 ~ 40271437 (+)
AMCG00013725 plxna2,LOC108425528,LOC103385266,LOC106567158,LOC107594012 coding upstream 207773 40111794 ~ 40120125 (+)
AMCG00013720 NA coding upstream 430730 39789632 ~ 39897168 (+)
AMCG00013724 NA coding upstream 547708 39779219 ~ 39780190 (+)
AMCG00013721 NA coding upstream 548844 39761180 ~ 39779054 (+)
AMCG00013728 NA coding downstream 104331 40445649 ~ 40467813 (+)
AMCG00013734 magi3,LOC103386588,LOC104962253 coding downstream 133707 40475025 ~ 40478788 (+)
AMCG00013731 magi3 coding downstream 214359 40555677 ~ 40604675 (+)
AMCG00013735 NA coding downstream 269518 40610836 ~ 40622089 (+)
AMCG00013736 NA coding downstream 322267 40663585 ~ 40665746 (+)
G46138 NA non-coding upstream 1388387 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1706555 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1737739 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 1760579 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 1790840 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 50570 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 75314 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 541531 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 861746 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1072042 41413360 ~ 41413600 (+)
G46244 NA other upstream 765598 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 1505944 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1620544 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 1654427 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 1761617 38564489 ~ 38566281 (+)
G46345 NA other downstream 9334 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 36414 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2086783 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2303669 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2308872 42650190 ~ 42661844 (+)

Expression


Co-expression Network