G40119


Basic Information

Item Value
gene id G40119
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 9264878 ~ 9265093 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU50015
aattaacatcctttCATGCTTTGtggtatgtataaaaatgctgagcaggccgagttgaccttgattttggatcaagatggcaagaggaaaggatctaagtgactttgaaagaggggtcattattggggcacgaatggcaggagcttcagtcacaaagacgctcaactagctagtgttctggacaagtgggcaagtgcatgtgtgggacaccaagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50015 True 216 lncRNA 0.45 1 9264878 9265093

Neighbor

gene id symbol gene type direction distance location
AMCG00012828 btg1,LOC106609569 coding upstream 10323 9251194 ~ 9254555 (+)
AMCG00012819 NA coding upstream 153102 9095412 ~ 9111776 (+)
AMCG00012816 NA coding upstream 186977 9064317 ~ 9077901 (+)
AMCG00012817 nfyb,LOC106561000,LOC107658836,LOC107656315,LOC107592261,LOC107743639,LOC107696291 coding upstream 221337 9039322 ~ 9043541 (+)
AMCG00012815 NA coding upstream 392720 8854081 ~ 8872158 (+)
AMCG00012832 NA coding downstream 110074 9375167 ~ 9382501 (+)
AMCG00012833 NA coding downstream 147233 9412326 ~ 9469248 (+)
AMCG00012834 NA coding downstream 369141 9634234 ~ 9691339 (+)
AMCG00012835 NA coding downstream 437177 9702270 ~ 9723930 (+)
AMCG00012836 snd1,LOC107738807 coding downstream 486543 9751636 ~ 9770671 (+)
G40041 NA non-coding upstream 171032 9091314 ~ 9093846 (+)
G40022 NA non-coding upstream 211059 9051087 ~ 9053819 (+)
G39951 NA non-coding upstream 597414 8666754 ~ 8667464 (+)
G39838 NA non-coding upstream 995657 8268994 ~ 8269221 (+)
G39776 NA non-coding upstream 1132314 8057019 ~ 8132564 (+)
G40121 NA non-coding downstream 29238 9294331 ~ 9294642 (+)
G40145 NA non-coding downstream 208452 9473545 ~ 9473868 (+)
G40146 NA non-coding downstream 208880 9473973 ~ 9474220 (+)
G40203 NA non-coding downstream 907161 10172254 ~ 10172463 (+)
G40214 NA non-coding downstream 1109938 10375031 ~ 10424371 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 134667 9112460 ~ 9130211 (+)
AMCG00012818 NA other upstream 179178 9083662 ~ 9085700 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other upstream 694987 8536233 ~ 8569891 (+)
AMCG00012797 NA other upstream 919023 8335898 ~ 8345855 (+)
G39709 LOC101154678 other upstream 1428664 7835346 ~ 7836214 (+)
G40224 NA other downstream 1171814 10436907 ~ 10444447 (+)
AMCG00012848 NA other downstream 1275635 10540728 ~ 10541960 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other downstream 3188146 12453239 ~ 12500402 (+)
G40629 NA other downstream 3223482 12488575 ~ 12535929 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 5163220 14428313 ~ 14433201 (+)

Expression


Co-expression Network