G45617 (LOC100846954)


Basic Information

Item Value
gene id G45617
gene name LOC100846954
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37488729 ~ 37538310 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56849
aaagaaattatcagtctataactttaatggtaggtgtattttaacagtgagagacagaataacagcaaacaaatccagaaaaatgcatttcaaaaaagttttaaattgacttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtgtcttttatacaggtaacgagctgagattaggagcactctcttaaagggagtgacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaagaggagaactgggtgaaagtgttgtggtcagatgagatcaaaatcaagctctttggcatcaactcaactcaccgtgtttggaggaggaggaatgaccccaagaacaccatccccaccatcaaacatggaggtggaaacattatgctttgggggtgtttttctgctaaggggacaggacaactccACCGCAtgaaagggacgatggacggggccatgtaccgtcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtattccagcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttggcAAACGTAagccttgaaaccttaatgacttggagagtaTCTAAAAAGAGGAGGgagacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatacgtttttctggattttgttgttgttattctgtctctcactgctaaaatacacctaccattaaaattatagactgatcatttctttgtcagtgggcaaacgtacaaaatcagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56849 True 1150 TUCP 0.44 4 37488729 37538310

Neighbor

gene id symbol gene type direction distance location
AMCG00013596 NA coding downstream 175783 37292939 ~ 37312946 (-)
AMCG00013597 NA coding downstream 210978 37251216 ~ 37277751 (-)
AMCG00013594 LOC107601731,LOC107690446,LOC107743699 coding downstream 275131 37200451 ~ 37213598 (-)
AMCG00013592 NA coding downstream 297094 37175701 ~ 37191635 (-)
AMCG00013590 klc3,LOC108425834,LOC106580868 coding downstream 336868 37139369 ~ 37151861 (-)
AMCG00013607 LOC107683438,LOC107592930,LOC107672095,LOC106580762,LOC107757416 coding upstream 146299 37684609 ~ 37687237 (-)
AMCG00013611 NA coding upstream 178149 37716459 ~ 37735391 (-)
AMCG00013610 zc3h4,LOC106580865,LOC106612521 coding upstream 214413 37752723 ~ 37758389 (-)
AMCG00013617 NA coding upstream 243283 37781593 ~ 37791151 (-)
AMCG00013621 NA coding upstream 338005 37876315 ~ 37891990 (-)
G45611 NA non-coding downstream 26783 37459537 ~ 37461946 (-)
G45599 NA non-coding downstream 94872 37390658 ~ 37393857 (-)
G45583 NA non-coding downstream 160973 37325359 ~ 37327756 (-)
G45513 NA non-coding downstream 382106 37101887 ~ 37106623 (-)
G45509 NA non-coding downstream 401869 37086586 ~ 37086860 (-)
G45654 NA non-coding upstream 143097 37681407 ~ 37681619 (-)
G45655 NA non-coding upstream 143667 37681977 ~ 37682213 (-)
G45658 NA non-coding upstream 152223 37690533 ~ 37691169 (-)
G45716 NA non-coding upstream 272394 37810704 ~ 37821611 (-)
G45726 NA non-coding upstream 314465 37852775 ~ 37856872 (-)
G45614 supt5h other downstream 5121 37482916 ~ 37483608 (-)
G45571 NA other downstream 264905 37130858 ~ 37223824 (-)
G45468 NA other downstream 528815 36959177 ~ 36959914 (-)
AMCG00013578 NA other downstream 603236 36879193 ~ 36885493 (-)
AMCG00013531 NA other downstream 3789017 33692844 ~ 33699712 (-)
AMCG00013608 NA other upstream 125645 37663955 ~ 37670395 (-)
G45764 NA other upstream 471788 38010098 ~ 38012216 (-)
G45790 NA other upstream 497000 38035310 ~ 38035667 (-)
G45792 slc8a2,LOC103358178,LOC107739881 other upstream 505426 38043736 ~ 38043968 (-)
G45906 NA other upstream 654724 38193034 ~ 38231291 (-)

Expression


Co-expression Network