G46982


Basic Information

Item Value
gene id G46982
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43522328 ~ 43522882 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58579
tggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagaacatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaagtcagggtgcccatgctgacccccgtccactgccgaaagcgcctacaatgggcacgtgagcatcagaactggaccacggagcaatggaagaaggtggcctggtctgatgaatcacgagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58579 True 344 lncRNA 0.52 2 43522328 43522882

Neighbor

gene id symbol gene type direction distance location
AMCG00013814 sike1 coding downstream 58264 43458376 ~ 43464064 (-)
AMCG00013809 csde1,LOC107731193,LOC106566849,LOC107549382 coding downstream 67283 43432634 ~ 43455045 (-)
AMCG00013808 nras,LOC107682628 coding downstream 99146 43409249 ~ 43423182 (-)
AMCG00013810 ampd1 coding downstream 113376 43390772 ~ 43408952 (-)
AMCG00013805 NA coding downstream 148910 43354997 ~ 43373418 (-)
AMCG00013813 NA coding upstream 16008 43538890 ~ 43549246 (-)
AMCG00013819 NA coding upstream 46684 43569566 ~ 43593466 (-)
AMCG00013823 NA coding upstream 172025 43694907 ~ 43700141 (-)
AMCG00013822 slc16a1b,slc16a1a,LOC107591766,LOC107711946,LOC107669643,LOC107717534,LOC107679710 coding upstream 181116 43703998 ~ 43710995 (-)
AMCG00013825 LOC106517667,LOC108231490,LOC103356074,LOC106582736,LOC107098533,LOC105928018 coding upstream 481995 44004877 ~ 44006633 (-)
G46855 NA non-coding downstream 452155 43069972 ~ 43070173 (-)
G46849 NA non-coding downstream 452592 43035563 ~ 43069736 (-)
G46817 NA non-coding downstream 520625 43001481 ~ 43001703 (-)
G46815 NA non-coding downstream 523404 42998725 ~ 42998924 (-)
G46735 NA non-coding downstream 826680 42693662 ~ 42695648 (-)
G46990 NA non-coding upstream 43913 43566795 ~ 43566995 (-)
G47041 NA non-coding upstream 396779 43919661 ~ 43919962 (-)
G47055 NA non-coding upstream 593358 44116240 ~ 44123206 (-)
G47082 LOC100696538,LOC103362809,LOC102199655,LOC108254710,LOC103467398,LOC102777028,LOC108265463 non-coding upstream 602884 44125766 ~ 44148931 (-)
G47096 NA non-coding upstream 699504 44222386 ~ 44223384 (-)
G46742 NA other downstream 821260 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 1066570 42428777 ~ 42455758 (-)
AMCG00013732 NA other downstream 2885100 40618343 ~ 40637228 (-)
G46423 NA other downstream 2913800 40603601 ~ 40608528 (-)
G46418 NA other downstream 2934936 40586816 ~ 40587392 (-)
AMCG00013820 tmem167b other upstream 86400 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 1815977 45338859 ~ 45344015 (-)
G47261 NA other upstream 2100356 45623238 ~ 45623895 (-)
AMCG00013882 cry4,LOC108413014 other upstream 2396754 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 2439308 45962190 ~ 45974311 (-)

Expression


Co-expression Network