AMCG00014772


Basic Information

Item Value
gene id AMCG00014772
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30594129 ~ 30610104 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014772
CATGTCAATGGACATTGCACTAGTCCCACCTCACAGCCCTGCAACACTGGGAAGCGCATCTCCAGCACTGAAGGCACTAAGCTCAATCGCCGAGGTCCTGGCCGGCCTCCTTTCAGAAAAGCCCAGTCTGCTGCTTGCATGGAGATCTCTTTGCCTGTCTCCCACACAGAAGGTTACGCTTCCAGACGGGCAATGCTTCAGCAATTACACGGAGTCAGTATTTACTCACATGACGAGCACCACGCTGCAACTTACTCATGGAGTGAAAAAGAAAGCCGGGAAAATTCGTTCAGCCGCTCCCGCAGCTCCAGCGTGTCCAGCATTGACAAGGAGACCAAGGAGGCCATCACTGCGCTGTACTTCATGGAATCATATGCCCGTAAAAATGACACCACCCTCTCGCCGTCTCTTTGGGTCGGCACAAGTTTAGGGGTGGTGTTGGCCATCTCTTTGAACCTGCCTGTCGGTGAGGAACAGCGACAAACTGAGCCCATCGTGGCATCACCGAGTGGCACAGTGCTGATGTTAAAAGGATCTGTGCTGACGTTTGCTTCCCTGGACTGCTCGGGGGGGCTAATTCACCAGCCTTACGAGGTGTGGAGAGACGCTCACAGTTTGGACGAGCACGAGAAACCCCGCAAGAGGAAGCTCGTCAACTTCTCTCCCTCCACTTCTCAGGATACAGTGGATTACCAGTTTGCAGTAATCTGCTCGGAAAAACAGGCCAAAGTCTTCTCACTGCCATCTCAAACCTGCCTTTACGTACACAACATCACAGAAGCGTCTTTTGTCCTCCGGGCTGACGTTGTTACACTTTGTAACAGCGTCTGCTTGGCTTGCTTCTGTGCCAACGGACATATCATGACTCTCAGCTTACCTAGTCTAAGGCCGATGCTGGATGTGAACTACCTGCCTTTGACAGACATGAGGATCGCACGGACTTTCTGCTACACCAATGGGGGGCAGGCCCTGTATCTGAGCTCCCCTACAGAGATACAGCGCATCACATACAGCCAAGAGATGTGTGACAACCTACAGAATCTGACTAAACCTACTGTTGGGGAGGCTGCTGCAGGGAAGGCTTCCCGGAGTCTGGCTCAGCACATCCCAGGCCCAGGGGGTATGGAGGGCATGAAGGCCGCTGCGGGTGGGGTGGTGGGAGACTTGGCACGGGCCCGCATTGCGCTGGAGGAGAGAGGACAGAAACTAGGCGACCTGGAGGATCGTACTGCAGCCATGATGGCCAACGCAGAGTCCTTCTCCAAGCACGCACAC

Function

GO: NA

KEGG:

id description
ko04024 cAMP signaling pathway
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014772 True 1275 mRNA 0.54 7 30594129 30610104

Neighbor

gene id symbol gene type direction distance location
AMCG00014770 NA coding upstream 45607 30545213 ~ 30548522 (+)
AMCG00014769 stxbp5l coding upstream 62630 30525993 ~ 30531499 (+)
AMCG00014767 NA coding upstream 343863 30241706 ~ 30250266 (+)
AMCG00014776 NA coding upstream 382298 30197763 ~ 30211831 (+)
AMCG00014773 NA coding upstream 411732 30175067 ~ 30182397 (+)
AMCG00014779 NA coding downstream 49497 30659601 ~ 30660595 (+)
AMCG00014774 NA coding downstream 90102 30700206 ~ 30710420 (+)
AMCG00014768 NA coding downstream 118259 30728363 ~ 30741144 (+)
AMCG00014771 NA coding downstream 237068 30847172 ~ 30851142 (+)
AMCG00014781 NA coding downstream 297065 30907169 ~ 30917566 (+)
G72426 NA non-coding upstream 1401851 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1433704 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 1456776 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 1602830 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 1608553 28981122 ~ 28985576 (+)
G72767 NA non-coding downstream 226732 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 231456 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 236058 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 345801 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 393268 31003372 ~ 31003788 (+)
G72605 NA other upstream 742308 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 747543 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1314980 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1337775 29247875 ~ 29256354 (+)
AMCG00014729 NA other upstream 1756219 28797049 ~ 28837910 (+)
AMCG00014777 NA other downstream 154247 30764351 ~ 30812287 (+)
G72785 fam160a2 other downstream 368112 30978216 ~ 30978825 (+)
G72786 NA other downstream 369466 30979570 ~ 30980252 (+)
G72787 NA other downstream 379959 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 533319 31143423 ~ 31147877 (+)

Expression


Co-expression Network