AMCG00014801


Basic Information

Item Value
gene id AMCG00014801
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31707248 ~ 31709519 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014801
ATGTCGACTCCTAGAGTTGCACTAGTGACCGGATCTAACAAAGGCATCGGGTTGGCGGTGGTGCGGGCTCTGTGCCAGCAGTTCGCGGGGGACGTGTACCTGACAGCCCGGGACGTGGGGCGGGGGACGGACGCGGTGCGGAGCTTGAAGTCCGAGGGACTGAACCCCTTGTTCCACCAGCTGGACATCACCAACCCCGACAGCAGACGAAGCGTTAGGGACTTCTTGCAGGAGAAATACGGGGGTCTGGACGTGCTTATTAACAATGCTGCCATTGCCTTCAAAGTGGTTGACCCAACGCCATTTGCAGTTCAGGCAGAAGTGACCCTCAACACAAACTTCTTTGCCACTAGAGACCTCTGCAACGAGCTTCTTCCCATCATCAAGCCAAGAGGCAGGGTGGTAAATGTGTCCAGTGTGGCTGGCTCCATGGCTCTGAAGCAGTGCAGTCAGGAACTGCAGGCCAGGTTCCGGAGTAAAGACATCAGCGAGGAGGAGCTGGACAGTCTGATGCAGAGCTTTGTGGAGGAAGCCAAGAGCGGTGTACACACTCAGCGAGGGTGGCCCAACTGGGGCTACGGAGTGTCCAAAATCGGGGTAACAGTCCTCTCCAGGATCCAGGCCTGGAAGATCCAGAGAGAGAGGCCTCAAGACAACATCCTGATCAATGCCTGCTGCCCCGGCTGGGTGAGGACGGATATGGCGGGGCTGCAAGCCACCAAATCCCCAGATGAGGGGGCCGTCACCCCC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00079 CBR1; carbonyl reductase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014801 True 750 mRNA 0.58 3 31707248 31709519

Neighbor

gene id symbol gene type direction distance location
AMCG00014800 NA coding upstream 11075 31681531 ~ 31696173 (+)
AMCG00014792 NA coding upstream 376573 31312973 ~ 31330675 (+)
AMCG00014788 poglut1 coding upstream 398986 31297750 ~ 31308262 (+)
AMCG00014787 vangl1,LOC106574540 coding upstream 442993 31241301 ~ 31264255 (+)
AMCG00014783 NA coding upstream 662507 31041891 ~ 31044741 (+)
AMCG00014798 NA coding downstream 17767 31727286 ~ 31741350 (+)
AMCG00014804 NA coding downstream 43757 31753276 ~ 31763835 (+)
AMCG00014805 NA coding downstream 54661 31764180 ~ 31765038 (+)
AMCG00014803 NA coding downstream 56545 31766064 ~ 31769661 (+)
AMCG00014802 NA coding downstream 93411 31802930 ~ 31825314 (+)
G72912 NA non-coding upstream 3675 31703146 ~ 31703573 (+)
G72911 NA non-coding upstream 4813 31702162 ~ 31702435 (+)
G72875 LOC103376870 non-coding upstream 115143 31524315 ~ 31592105 (+)
G72861 NA non-coding upstream 243437 31462146 ~ 31463811 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding upstream 419814 31278087 ~ 31287434 (+)
G72926 NA non-coding downstream 36004 31745523 ~ 31746900 (+)
G73017 NA non-coding downstream 256403 31965922 ~ 31966189 (+)
G73018 NA non-coding downstream 257837 31967356 ~ 31969205 (+)
G73019 NA non-coding downstream 262466 31971985 ~ 31995538 (+)
G73045 NA non-coding downstream 546490 32256009 ~ 32256776 (+)
AMCG00014793 NA other upstream 184061 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 559371 31143423 ~ 31147877 (+)
G72787 NA other upstream 710885 30990063 ~ 30996363 (+)
G72786 NA other upstream 726996 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 728423 30978216 ~ 30978825 (+)
G72925 NA other downstream 7599 31717118 ~ 31754930 (+)
AMCG00014799 NA other downstream 81382 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 230034 31939553 ~ 31962971 (+)
G73103 NA other downstream 832991 32542510 ~ 32561489 (+)
G73244 NA other downstream 1655236 33364755 ~ 33366100 (+)

Expression


Co-expression Network