AMCG00014812


Basic Information

Item Value
gene id AMCG00014812
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32242954 ~ 32255291 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014812
ATGTGTGTAGCGGAAAGACGTCAGCCGTACAGTGGCAACGACTGGTGTTCGGGGGGCGAAAGTGAAGAAGACGATCCAGGCTTCTACAactGTAATTCCAGTGATGTGAAGCCTCAGGATTCGAACTCCCTCCCTTCTTCCAATGCTGGAATCAGCAGATCTTCCACACCTTCTCACAATTCTGTGGGGGTACAGAATGCGGTATCAGAACCTACAAGCAGCCAAAAGGCTCCATCAAAAGTTGTTTACGTCTTTTCCACTGAGATGGCCAACAAGGCGGCTGATGCTGTTGTGACGGGCCATGCAGAATCCATTGTTGCCTACCATATGAAGAATATCTCCAACAGCAAGACCGAGAAGACCCACCTGCCTATGaaCAATCAGTTAGGTCCTGGTCGAAATGAGCAGAAGGCCCACCAGCAGCAAGcaccaccactgcagcagcaACAGTCATCTCATCCGCCAGAGCAAAACCATCAACAGGCATCCAAAGCACAGCCCAGCCAACAGCAACCCCAACCTCAGCAGCAAGCGTCTAAACCTGGAAACTTGCCACAGGACAGTGCAGGGGGCATGGACAATAAAAGCCTGCCAAGCAGTAGTCCCAGAAACGCCACTCCCCAAGACAACACTAATCCCAGCAGTACGCCTGGTAGCCAGTCTGCCTGCACCCCTGGGCCCCAGTCAGGCTTCCCCTCCCTAGAAACCAAGGGGGATTCCAAAATGAcaccacagcaacagcagcagcagcatcaccAGCAGCTGGCTAATGAAATTATATCCAGCATGGGCGATAACCCTGAGGGCCTTTCCCAGGAGCAGTTGGAGCACAGGGAACGTTCCCTACAGACTTTGCGGGATATCCAGCGTATGCTTTTCCCAGACGAGAAAGATTTTGCTTTGAAGGATATTTCAGCCATGGGACAAGGCAACACTGGGGCTCCTCCCCAGAATGCAAACATGATGGAAGGCATACCCAAAAAAACAGATCAAGGACCCCTCCAAGCTATGATTGCCCAGTCGCAAAGCCTTGGCAAGCCGCCTGGTTCAAGGCCAGAAGGACCTCCGTTTGGGCAGCCAGGCCATAGGGACATGCCCTTCTCTCCTGATGAGTTGGGGCACCCGTCTGGGCCACCCATGAATTCACACCCAGGGCCAGAGCACTCGGATCACATGACACCAGAGCAAATGGCCTGGCTAAAGTTGCAGCAGGAATTCTATgaggagaaaaagagaaagcaggAACAGGTGCAGCATAGACCCATGACAGACATGATGCTTCATCAGCATGGTCCCAGAGCCATGATGAGGGGTCCCCCACCTCCGTATATGAACCCTGGGGAGGTCTGGGGACCTGGTGGGCCTGAACCCTTTGGTGACCAAATGAACATGCCACCAAGAGGCATACCCCCTCACCCAATGCAGAGAATGCCAGGATTCCCTGGAATGATCAATCCTGACATGGATGGTGGCCCAAATCCCATGCCCAGACCTGGCATGAACTGGCCAGATGACATGCCCAAGATGGGGGATGGAAGAGGCTTCCCTCCGGTCCAAGCCGTATTTGGAGGTCCAGGAGGCCGAGTTGAGAGATTCCCTAACCCCCAGGCAGTGCAGGAAGGAATGTTCCAGCATCAGATGCAAGATAAACAGCAAATAGGTATGCCACCAGGAATGGTTATTGACAATGTGCGAGGACCACCCATGGACATGAACCGGATGATGGGGAACCAAAGACCCATGGATCCTGGCAGTAACAATGGAGGCGGCGTCATGTTCCCCAGAATGCCGGGAGATGGCCCGATGAGCCCTTCTAGGATGGAGTTTGTCAAAGGTCCAGGGAGGGATATGGAGTTTGGTATGGGGCCTGGAAGTATGAGCATGAAAGAGATGAACCTCAATGTCAACATGGGTTCAAACCCCCAAATAATGGCTTCCAAGATGCGAGAGCCACCCATGAACCTGAGTCCTGaggaaattatgaaaatgcGACAAGGCGGTGGAGGACCACCTGAGAATGTAGGCCCCCAGCAAAAGATGCTTCAAGGACACCAGTTTTCTGACCAGCCACAGGAATTCATGGGGCCCAACCGTCACTTCCCAGGAATGCCCCCAGGGCCAGGCAACATGAGGGGGCCTCGGGGAGAGCAGCCTTTCGGGCCTGAGCAAAGGACTAATGCTGGAGGCAATGCCAGGCTCAGTCATATGCCACCACTACCTCTAAATCAGCCCCCCAATTCTGGCAATCTCAGTTCAGGCCCACCTCCCAACCAGAGGAACCTGGGACGGAAGCCTTCAGACTTGAGCGTCTCAGCCGGGCCTGTCAACTCACCCAATGTCAACCCCTTAAAGTCACCCACACTGAGGCAGGTGCAGTCTCCCATGCTAGGCTCCCCCTCTACCAACCTGAAGTCACCGCAGACTCCCTCTCAGCTGGCCGGAATGCTCACTGGTCAgtcggctgctgctgctgccgctgcggCGGCGGCGGCTGCTGCCTCCATCAAATCCCCTCCCATCATGGGCTCTGCCGCCGCTTCTCCCGTCCACCTCAAGTCACCATCTCTCCCTGCACCTTCTCCAGGATGGACGTCCTCTCCTAAGCCTCCGATGCAAAGCCCCGGCATCCCCCAGAATAACAAGCCCTCACTAAGCATGACTTCTCCAAACATGATGGGTAGCATAGAACAAGGTGGAAGTGGACCCCCCTCAGCGCCACCTCCCAACAGCTCCTCTGGGCCGCCTGGTTCTATGAATCTTCCTGGAAGTCTTCCGTCCGGCAGCCCCTACGCCATGCCACCCGAGCCCACCTTGTCCCAGAACCCCCTGTCTATCATGATGTCCCGTATGTCCAAGTTTGCCATGCCCAGCTCCACCCCCCTCTACCATGATGCCATCAAGACAGTCGCCAGCTCGGATGACGATTCACCGCCTGCCCGCTCGCCCAACTTGCCATCCATGAACAACATGCCTGgAATGGGAGTAAATCACCACTCGAACCACCCTCGCATGATGGCTCCAAACTCTTCAGGGCACATGCCCTCTCTCAGCCCCATGGGGATGAACACAATGGGGTCCCAGCCACTCTCACATGGCCTCCCAAATCAGATGCCATCACCAAACCCAATGGGGCCCAACATCCCTCCACACTCCGGACCCATGGGCCCTGGCATGATGCCACATGGTATGATGATGCCTCCTGTTTCTCAAGATCCTGGAATGGGTAACCCCCAGATGATACCTCAAGGTCGAATGGGCTTTCCTCACAGGCAACAGGGTTTCCCTTCAGTGCAATCTCCCCCACAGCAAGTCCCCTTCCCTCACAACAGCCCAGGCCCAGGCGGGGTTCAGGGGGGTTTCCCTCACGGAATGGGCTTTCCAGGCGAAGGGGGGCCCCTTAGTCGGCTCGGCAACATGCCCCAAGGCCCTGGTGGTGAACCAGGGATCTGTAAACCGAATGCCCCAGGTGGTCAAGAGCCCTTCGGCAGCATGCCCTCCGTTTTCACTGACCCCGACCTGCAGGAGGTCATCCGACCTGGTGCTTCAGGAATCCCTGAGTTTGACTTATCACGGATCATCCCTTCTGAGAAGCCCAGCCAGACACTGCAGTACTTCCCACGAGGAGAAGCTCCAGGCAgcaaacccccccacccctcaggCCCCGTACCAGGCTTCCCTCAGATGCAGGGGATGATGGGGGAGCCAAACCCCAGAATGGGACTTCCCATGCCAGGCATGGGGGGACCTGGACCAGGCCACATGGGCCCTCAGGACATGCCCATGGGCAATCCAGGCCATAACCCAATGCGGCCGCCTGGCTTCATGCCTCAAGGCATGATGGGACCTCAGCATCGAATCATGTCCCCGGCACAGACTGGTATGCCTGGGCAGCCTGGTATGATGGGTGGCCCGGGAATGATGTCAGGCAAGGAGCGAGGGCCAGGTGTTCTTTATAACCACCCGGGACCGGTGGGGTCTCCTAATATGATGATGTCTCTACATGGTATGGGTGGCCCACAGCAAACTATGATGATGCCACCTCAGATGAGGCCGAGAGGCATGGCAGCAGATGTGGGAATGGGTTTCAATCCCGGGCCAGGAAACCCGGGGAATATAATGTTCTAA

Function

GO: NA

KEGG:

id description
K22649 BCL9, BCL9L; B-cell CLL/lymphoma 9 protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014812 True 4125 mRNA 0.56 6 32242954 32255291

Neighbor

gene id symbol gene type direction distance location
AMCG00014810 NA coding upstream 228563 32013184 ~ 32014391 (+)
AMCG00014808 LOC107579096 coding upstream 327116 31896940 ~ 31915838 (+)
AMCG00014807 NA coding upstream 352506 31865131 ~ 31890448 (+)
AMCG00014802 NA coding upstream 417640 31802930 ~ 31825314 (+)
AMCG00014803 NA coding upstream 473293 31766064 ~ 31769661 (+)
AMCG00014815 gja8,LOC107746070,LOC107566528,LOC107566539,LOC107603011,LOC107746288,LOC107676899 coding downstream 141396 32396687 ~ 32397508 (+)
AMCG00014817 taf6 coding downstream 398452 32653743 ~ 32663154 (+)
AMCG00014821 LOC107738524 coding downstream 479577 32734868 ~ 32756137 (+)
AMCG00014822 NA coding downstream 503674 32758965 ~ 32768979 (+)
AMCG00014827 NA coding downstream 1442232 33697523 ~ 33778248 (+)
G73019 NA non-coding upstream 247416 31971985 ~ 31995538 (+)
G73018 NA non-coding upstream 273749 31967356 ~ 31969205 (+)
G73017 NA non-coding upstream 276765 31965922 ~ 31966189 (+)
G72926 NA non-coding upstream 496054 31745523 ~ 31746900 (+)
G72912 NA non-coding upstream 539381 31703146 ~ 31703573 (+)
G73045 NA non-coding downstream 718 32256009 ~ 32256776 (+)
G73105 NA non-coding downstream 302990 32558281 ~ 32564339 (+)
G73104 NA non-coding downstream 310502 32565793 ~ 32566896 (+)
G73120 NA non-coding downstream 320156 32575447 ~ 32575879 (+)
G73158 NA non-coding downstream 417220 32672511 ~ 32681805 (+)
AMCG00014811 NA other upstream 279983 31939553 ~ 31962971 (+)
AMCG00014799 NA other upstream 444491 31790901 ~ 31798463 (+)
G72925 NA other upstream 488024 31717118 ~ 31754930 (+)
AMCG00014793 NA other upstream 719767 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 1095077 31143423 ~ 31147877 (+)
G73103 NA other downstream 287219 32542510 ~ 32561489 (+)
G73244 NA other downstream 1109464 33364755 ~ 33366100 (+)
G73292 LOC100846954 other downstream 1983643 34238934 ~ 34239400 (+)
G73329 NA other downstream 2524831 34780122 ~ 34780590 (+)
G73343 NA other downstream 2686720 34942011 ~ 34960447 (+)

Expression


Co-expression Network