AMCG00014913


Basic Information

Item Value
gene id AMCG00014913
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39606887 ~ 39621186 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014913
TGTGGACCTGTCGGAGCTGATCAAGGGAGCGACCCGCCAGGCTCACGAGCGCGCAGAGAACACAGCGCTGATGCTGCGCTTCCAGAAGGGCCAGATCACCCTGCCCGAGCACAAGTTGCTGCTGTGCTGTCTGTACACTGTGTACacagccctggaggaggagctAGATCGGAACGCGTCCCACCCCTCTGTGGCTCCAGTCCACTTCCCAGCCGAGCTGAGCCGGGTCGCCGCCCTGGAGGCTGACCTGCAGTACCACCTGGGCCCGGGCTGGAGAGAGCGGGTGCTGGGCAAGATGGCCCAGAAGGCCCTGGGGCTGCCGGGCGGTGAGGGGGCGGGGCTGGATTTCTTCTCGTTTCCGGGGGTTACCAACGCCACACGCTTCAAGCAG
>TU92948
GTAAAATTGAACTAGAAAGCgagacacaacacagacacagagagcgaAAAGCaccagagagacacagacagagacagagccgCCTTCAGACCCACAGAGATCTCCTGACTGAGACACCGAGGTTACAGCCATGGACACCCAGaaccacagagagaaacagagccAGGACACCACAGACAGTGTGGACCTGTCGGAGCTGATCAAGGGAGCGACCCGCCAGGCTCACGAGCGCGCAGAGAACACAGCGCTGATGCTGCGCTTCCAGAAGGGCCAGATCACCCTGCCCGAGCACAAGTTGCTGCTGTGCTGTCTGTACACTGTGTACacagccctggaggaggagctAGATCGGAACGCGTCCCACCCCTCTGTGGCTCCAGTCCACTTCCCAGCCGAGCTGAGCCGGGTCGCCGCCCTGGAGGCTGACCTGCAGTACCACCTGGGCCCGGGCTGGAGAGAGCGGGTCGCCAAGCCCCCCGCCGCCGCGCTGAGATACGCACAGAGACTCCGAGAGgtgGGGAAGGACCACCCCGAGCTGCTGGTGGCCCACTCCTACACCCGTTATCTTGGTGACCTGTCGGGGGGGCAGGTGCTGGGCAAGATGGCCCAGAAGGCCCTGGGGCTGCCGGGCGGTGAGGGGGCGGGGCTGGATTTCTTCTCGTTTCCGGGGGTTACCAACGCCACACGCTTCAAGCAGCTGTACAGATCACGCATGAACAGCCTGGAGCTAAGCCCCTCCCACAAGCAGGCTGTCACTCAGGAGGCCAACACTGCCTTCACACTGAACATAGAGGTGAGAGAGTGCGGTAAAttaacactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014913 False 391 mRNA 0.66 3 39618808 39621018
TU92948 True 865 TUCP 0.60 6 39606887 39621186

Neighbor

gene id symbol gene type direction distance location
AMCG00014907 hmgxb4,LOC106607053,LOC106601319 coding upstream 31299 39565733 ~ 39575588 (+)
AMCG00014908 NA coding upstream 77076 39511772 ~ 39529811 (+)
AMCG00014904 ttc26,LOC106607033 coding upstream 217200 39381101 ~ 39389687 (+)
AMCG00014900 myh9,myh9b,LOC107672897,LOC107745511,LOC107751969,LOC107572814 coding upstream 346610 39237624 ~ 39260277 (+)
AMCG00014899 NA coding upstream 373882 39227927 ~ 39233005 (+)
AMCG00014912 gcat coding downstream 2240 39623426 ~ 39626200 (+)
AMCG00014911 mcm5,LOC106607002 coding downstream 9504 39630690 ~ 39636561 (+)
AMCG00014919 NA coding downstream 85875 39707061 ~ 39707433 (+)
AMCG00014918 NA coding downstream 86348 39707534 ~ 39707752 (+)
AMCG00014922 NA coding downstream 211282 39832468 ~ 39846425 (+)
G74459 NA non-coding upstream 4789 39601852 ~ 39602098 (+)
G74442 NA non-coding upstream 21728 39584922 ~ 39585159 (+)
G74422 NA non-coding upstream 107227 39498703 ~ 39499660 (+)
G74363 NA non-coding upstream 125180 39476816 ~ 39481707 (+)
G74338 NA non-coding upstream 300913 39305580 ~ 39305974 (+)
G74484 NA non-coding downstream 26643 39647829 ~ 39659512 (+)
G74491 NA non-coding downstream 38347 39659533 ~ 39659958 (+)
G74486 NA non-coding downstream 61069 39682255 ~ 39722288 (+)
G74505 NA non-coding downstream 105280 39726466 ~ 39734537 (+)
G74511 NA non-coding downstream 122939 39744125 ~ 39744360 (+)
AMCG00014909 ankrd54 other upstream 18380 39584038 ~ 39588507 (+)
G74348 NA other upstream 131068 39336268 ~ 39475819 (+)
G74227 NA other upstream 795759 38810693 ~ 38811128 (+)
G74114 NA other upstream 1174026 38432374 ~ 38432861 (+)
G73850 NA other upstream 2088481 37518108 ~ 37518406 (+)
AMCG00014923 NA other downstream 243896 39865082 ~ 39875428 (+)
AMCG00014925 NA other downstream 330002 39951188 ~ 39953278 (+)
AMCG00014928 NA other downstream 342582 39963768 ~ 39973070 (+)
G74642 NA other downstream 538715 40159901 ~ 40160578 (+)
G74643 NA other downstream 540830 40162016 ~ 40163997 (+)

Expression


Co-expression Network