G74459


Basic Information

Item Value
gene id G74459
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39601852 ~ 39602098 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU92947
agtaatgtcaaatctgaaaacatggtGTGGAAAAGTGCTACATTGGACCATAGAAACAGTGTCTCATAAAGAATGATGATGAAATATTACATCAATAGATAATGTTGTCCAACTGGTTCATGTTCCTTGGTTATTGGTGTCAATGGATCTCATTATCCTGAAACTTTCATGATCGAAACATGGAATATTGTTCGTCAGTTTCCATAAAACTATGCATTAAGAGTAATGCAACAGTCACTTATCATTT

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU92947 True 247 lncRNA 0.34 1 39601852 39602098

Neighbor

gene id symbol gene type direction distance location
AMCG00014907 hmgxb4,LOC106607053,LOC106601319 coding upstream 26264 39565733 ~ 39575588 (+)
AMCG00014908 NA coding upstream 72041 39511772 ~ 39529811 (+)
AMCG00014904 ttc26,LOC106607033 coding upstream 212165 39381101 ~ 39389687 (+)
AMCG00014900 myh9,myh9b,LOC107672897,LOC107745511,LOC107751969,LOC107572814 coding upstream 341575 39237624 ~ 39260277 (+)
AMCG00014899 NA coding upstream 368847 39227927 ~ 39233005 (+)
AMCG00014912 gcat coding downstream 21328 39623426 ~ 39626200 (+)
AMCG00014911 mcm5,LOC106607002 coding downstream 28592 39630690 ~ 39636561 (+)
AMCG00014919 NA coding downstream 104963 39707061 ~ 39707433 (+)
AMCG00014918 NA coding downstream 105436 39707534 ~ 39707752 (+)
AMCG00014922 NA coding downstream 230370 39832468 ~ 39846425 (+)
G74442 NA non-coding upstream 16693 39584922 ~ 39585159 (+)
G74422 NA non-coding upstream 102192 39498703 ~ 39499660 (+)
G74363 NA non-coding upstream 120145 39476816 ~ 39481707 (+)
G74338 NA non-coding upstream 295878 39305580 ~ 39305974 (+)
G74333 NA non-coding upstream 316048 39285294 ~ 39285804 (+)
G74484 NA non-coding downstream 45731 39647829 ~ 39659512 (+)
G74491 NA non-coding downstream 57435 39659533 ~ 39659958 (+)
G74486 NA non-coding downstream 80157 39682255 ~ 39722288 (+)
G74505 NA non-coding downstream 124368 39726466 ~ 39734537 (+)
G74511 NA non-coding downstream 142027 39744125 ~ 39744360 (+)
AMCG00014909 ankrd54 other upstream 13345 39584038 ~ 39588507 (+)
G74348 NA other upstream 126033 39336268 ~ 39475819 (+)
G74227 NA other upstream 790724 38810693 ~ 38811128 (+)
G74114 NA other upstream 1168991 38432374 ~ 38432861 (+)
G73850 NA other upstream 2083446 37518108 ~ 37518406 (+)
AMCG00014913 NA other downstream 4789 39606887 ~ 39621186 (+)
AMCG00014923 NA other downstream 262984 39865082 ~ 39875428 (+)
AMCG00014925 NA other downstream 349090 39951188 ~ 39953278 (+)
AMCG00014928 NA other downstream 361670 39963768 ~ 39973070 (+)
G74642 NA other downstream 557803 40159901 ~ 40160578 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G578013 LOC106575464 non-coding NC_048571.1 CM023225.2 15195668 ~ 15198020 (+)