G73045


Basic Information

Item Value
gene id G73045
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32256009 ~ 32256776 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91281
GGTTGCAATTAGTGCATTACATGTTGCACTAGTCAGCACACAATACTGTTTACCTTGGCGTTGgtggaaaactttttttttttcctttatgaaCTCCTGTGTATAACAAAGCAAACTACAAAGCAAGACCTCATACAGAtaatagtattaaaaaataagcacaaaCATGGTTTAACTATAAgaaatagtgtttttttccctctctctcactctccttttttattatcaagagaaaaaaaaaactatggacAAAGTTAAGTAGAAACCATTGATTCTTCTGATATACAGTGTCTCATCTGGTTCTTGAAATACCATTTTTTGGgtttttgttaaaacaaattaaaaaaatcgaGGGGGAAGGGGGTTAGGGGATATCGGACAACATGCCTCATGTTTCCAGCAGTCAGGTCATCCCTTACTGCAGATTTTGACTTTTACTGTTTTACCTTGTGGCAACAGCCCAGGAGTATgacttattattgttgttattattagttttttgttttgttttgttttgtttttaaacttgctGTGTATCATTACTCAAGGTTATCCCAAGTATGTTTTGCTGTGGGAGTAGATCTGGATTAAAGAGGGTATCCAgaattttgttaaaaaataataaataaaaaaaaaagttaaaaaaaaaaaataataataataaaaaaaaagctttctttaTCTCCCTCCCCCTCTAGTGTAAAACTGTCATGTGTAACTCCATTGAATTTGGTACAGAACCACTTCCCAGGGCTGTGGtgttggaag

Function

GO:

id name namespace
GO:0030031 cell projection assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91281 True 768 lncRNA 0.33 1 32256009 32256776

Neighbor

gene id symbol gene type direction distance location
AMCG00014812 NA coding upstream 718 32242954 ~ 32255291 (+)
AMCG00014810 NA coding upstream 241618 32013184 ~ 32014391 (+)
AMCG00014808 LOC107579096 coding upstream 340171 31896940 ~ 31915838 (+)
AMCG00014807 NA coding upstream 365561 31865131 ~ 31890448 (+)
AMCG00014802 NA coding upstream 430695 31802930 ~ 31825314 (+)
AMCG00014815 gja8,LOC107746070,LOC107566528,LOC107566539,LOC107603011,LOC107746288,LOC107676899 coding downstream 139911 32396687 ~ 32397508 (+)
AMCG00014817 taf6 coding downstream 396967 32653743 ~ 32663154 (+)
AMCG00014821 LOC107738524 coding downstream 478092 32734868 ~ 32756137 (+)
AMCG00014822 NA coding downstream 502189 32758965 ~ 32768979 (+)
AMCG00014827 NA coding downstream 1440747 33697523 ~ 33778248 (+)
G73019 NA non-coding upstream 260471 31971985 ~ 31995538 (+)
G73018 NA non-coding upstream 286804 31967356 ~ 31969205 (+)
G73017 NA non-coding upstream 289820 31965922 ~ 31966189 (+)
G72926 NA non-coding upstream 509109 31745523 ~ 31746900 (+)
G72912 NA non-coding upstream 552436 31703146 ~ 31703573 (+)
G73105 NA non-coding downstream 301505 32558281 ~ 32564339 (+)
G73104 NA non-coding downstream 309017 32565793 ~ 32566896 (+)
G73120 NA non-coding downstream 318671 32575447 ~ 32575879 (+)
G73158 NA non-coding downstream 415735 32672511 ~ 32681805 (+)
G73212 NA non-coding downstream 547892 32804668 ~ 32806309 (+)
AMCG00014811 NA other upstream 293038 31939553 ~ 31962971 (+)
AMCG00014799 NA other upstream 457546 31790901 ~ 31798463 (+)
G72925 NA other upstream 501079 31717118 ~ 31754930 (+)
AMCG00014793 NA other upstream 732822 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 1108132 31143423 ~ 31147877 (+)
G73103 NA other downstream 285734 32542510 ~ 32561489 (+)
G73244 NA other downstream 1107979 33364755 ~ 33366100 (+)
G73292 LOC100846954 other downstream 1982158 34238934 ~ 34239400 (+)
G73329 NA other downstream 2523346 34780122 ~ 34780590 (+)
G73343 NA other downstream 2685235 34942011 ~ 34960447 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G103060 bcl9,LOC107746285,LOC107676875,LOC107566537 non-coding NC_035908.1 CM008311.1 12730421 ~ 12733320 (-)