G73848


Basic Information

Item Value
gene id G73848
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37511836 ~ 37512309 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU92225
TTGAAATCAATGAGACAAGCCCtttttttgtctattattttactaaataaaatatctttTAAGCGCCTCcgcacaccaccaccaccatgcaTATTTCTAATCACGGTGACCGTTATTCGCAAACTCCCATCTGTTAGAATTTCGACGTGACTTTGTAGTAAATTAGCTATACTCTCTAAGAAATCTGCAGCATCCAGCTCCCCCAAATTTCGCCTCCTCGAATAGAAAGGATTATTTAATGACCCCAAGCTCAGTCTAAGCTGTACAAAATCATTAGGACccacattgtgtgatatttcatttaGCAATCCTTGCACAGCTCCATGCACAATACGGACAGCATCCGTATAAGATTCTACCAGATCCAGGTTCACAAACCTGAATTCTTCATAAAACTCCATACCCCGAAACCTATTAATTTCTCGGTCATAGCGACGAATAATCTCCAAAAACACTCGAGGAGGGTCCCCGCCA

Function

GO: NA

KEGG:

id description
ko04622 RIG-I-like receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU92225 True 474 lncRNA 0.41 1 37511836 37512309

Neighbor

gene id symbol gene type direction distance location
AMCG00014853 cyh2,cyth4,LOC107558519,LOC107555099 coding upstream 481774 37000630 ~ 37030062 (+)
AMCG00014852 NA coding upstream 597333 36913400 ~ 36914503 (+)
AMCG00014850 NA coding upstream 778583 36617665 ~ 36733253 (+)
AMCG00014848 tmprss3,LOC107748899 coding upstream 1214113 36295716 ~ 36297723 (+)
AMCG00014837 NA coding upstream 1960029 35551157 ~ 35551807 (+)
AMCG00014862 NA coding downstream 184351 37696660 ~ 37706352 (+)
AMCG00014864 NA coding downstream 241486 37753795 ~ 37754523 (+)
AMCG00014863 NA coding downstream 242550 37754859 ~ 37755848 (+)
AMCG00014870 NA coding downstream 389488 37901797 ~ 37904976 (+)
AMCG00014867 NA coding downstream 423282 37935591 ~ 37944752 (+)
G73838 NA non-coding upstream 135221 37376275 ~ 37376615 (+)
G73832 NA non-coding upstream 186512 37325022 ~ 37325324 (+)
G73829 NA non-coding upstream 212238 37299385 ~ 37299598 (+)
G73828 NA non-coding upstream 213708 37297677 ~ 37298128 (+)
G73806 NA non-coding upstream 268390 37243235 ~ 37243446 (+)
G73852 NA non-coding downstream 19307 37531616 ~ 37532213 (+)
G73872 NA non-coding downstream 86419 37598728 ~ 37602411 (+)
G73890 NA non-coding downstream 135294 37647603 ~ 37647880 (+)
G73895 NA non-coding downstream 169058 37681367 ~ 37681639 (+)
G73896 NA non-coding downstream 171006 37683315 ~ 37683542 (+)
AMCG00014836 NA other upstream 2099249 35390634 ~ 35412587 (+)
G73343 NA other upstream 2551389 34942011 ~ 34960447 (+)
G73329 NA other upstream 2731246 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 3272436 34238934 ~ 34239400 (+)
G73244 NA other upstream 4145736 33364755 ~ 33366100 (+)
G73850 NA other downstream 5799 37518108 ~ 37518406 (+)
G74114 NA other downstream 920065 38432374 ~ 38432861 (+)
G74227 NA other downstream 1298384 38810693 ~ 38811128 (+)
G74348 NA other downstream 1823959 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 2071729 39584038 ~ 39588507 (+)

Expression


Co-expression Network