AMCG00015460


Basic Information

Item Value
gene id AMCG00015460
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9808818 ~ 9815466 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015460
ATGTACGGAGGGCCGGTGTCTGGAGCCACAATGGCGCCCGCCCCTCGTTGCagGGCCGCTGTGCTGCTGCGCGGTGTGACGCGCTGGCGGGCGGAGGAGGCGGTGCAGCCGCATCAGCCATCAGAGGTTCCTGCGCGCAGCTGCCCGGCAGTCACGGCCTCGGCGGGACGCCTGCACGTCCACGGACCCCAGGAACTGGCGAGGTTTGCTTTATTATTGTCGGGGTTTATGTGCGAGTTGGCAGGGGCGGGGGCGTACAGTATAATGTCCATGATGTGCGAGAAGGCAGTGATCAAGAAGGATCCCTTGCGGACGGTGGTGGGCAGTGACCGGTACCACATCAACAACAAGCTGGACAACAAGTATGACCCGCTGCCCGTGAGCAAGATCCTGCGGGAGGCAGAGCGGAAGGTGGGGCAGGAAGTGTCATACAGCGTGGCCCGGAGCAACTGTGAGCACTTTGTCACCAAGCTGCGCTGCAGTGCAGAGTTgcgtctctcctctcctcctaaGTGCCTGGCAATGGACGATCCCAAACAGATTGCTGCTGCCTCAACCCGCTCCACACTGTAA
>TU122260
GTGACGTCAGGGCTGTATAAAAGGTGTGCGCCCCTGCAGCTCAGTCTCTTGTTGTCTGGCTTGGCGGTGTGTGTGGCTGCAGCCCTGGGGCCGGTGTCTGGAGCCACAATGGCGCCCGCCCCTCGTTGCagGCTTTTTTGTGACCAGACCCTCCCAGCCTGATCTTGTGGATTGCCTTGGCTCTCCCCACAGTCAGGGAGGGCCTCCGTTGCCAGCAGGGTCACCCTCTACCTCCCCATAAACCTAATGATTCAAGGCAATGTATTCAAGTGATGTTGGTATTCAGTTGATGTTTTACTTCAGTTGTGTAACTCGAACTAGGAGTAAAATCCAGGAAACTGACCCCTACTGGACTGTTTTCCACGGACCAGGGCTGGACACCCTTATTGTTGGTCAGAAAAGTAACCCCTTTTGCTAGGCATTTCTGGGGTCACCCCATTATCATATTATAGGACCCTAGTAAAGCAACCAAAGAACTGCATTTTTAGGAGCTTATAACACTGAATTGTATCAACATTACTTGTAGAAGTGTTGCTTGTATTGTGTAGGGTTATTCTctggcagatgcccttgtccagggtgattGACTTGCTAGACCATTATAAGAATTGCAATGCATGGATACAATTAAACTTGTACATCCTGGCTCAATGAGGTAAGTGATCTCCCATAATGTAATGGGTAACCATGAATGTGGACACTGACCAATGGAAGTTGGTTACAGCAACTCCTGTGTGGCTTGGACCCGTCCACTCCAGGTTGTGGTGCTGGCTGGTCTTGAAGTGATGTACAATATGACTTGTAAATTGGAAAAATTAAAACTCTTTAAACTGGTCTCTGGTCTCTTCTGTGTAGTTGGCATGGGTGTAGATTTGCAAGTGCAGGAATGGACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015460 False 573 mRNA 0.62 5 9808818 9814935
TU122260 True 895 lncRNA 0.47 3 9813401 9815466

Neighbor

gene id symbol gene type direction distance location
AMCG00015454 NA coding downstream 39148 9756195 ~ 9769670 (-)
AMCG00015453 NA coding downstream 69503 9718458 ~ 9739315 (-)
AMCG00015452 rab1ba,LOC100695098,LOC103027853,LOC103373258,LOC101478491,LOC103148874,LOC107679256,LOC105022126 coding downstream 90738 9712438 ~ 9718080 (-)
AMCG00015451 NA coding downstream 117479 9686534 ~ 9691339 (-)
AMCG00015446 NA coding downstream 147839 9657586 ~ 9660979 (-)
AMCG00015469 NA coding upstream 56282 9871748 ~ 9876514 (-)
AMCG00015470 NA coding upstream 84206 9899672 ~ 9909434 (-)
AMCG00015477 NA coding upstream 181597 9997063 ~ 10003088 (-)
AMCG00015478 NA coding upstream 187670 10003136 ~ 10004260 (-)
AMCG00015486 NA coding upstream 268322 10083788 ~ 10100629 (-)
G98012 NA non-coding downstream 102787 9705727 ~ 9706031 (-)
G98006 NA non-coding downstream 127136 9681165 ~ 9681682 (-)
G97861 NA non-coding downstream 279665 9114016 ~ 9529153 (-)
G97906 NA non-coding downstream 424694 9383508 ~ 9384124 (-)
G97860 NA non-coding downstream 698768 9094155 ~ 9110050 (-)
G98126 NA non-coding upstream 114096 9929562 ~ 10017869 (-)
G98138 NA non-coding upstream 121610 9937076 ~ 9938322 (-)
G98163 NA non-coding upstream 210648 10026114 ~ 10075893 (-)
G98211 NA non-coding upstream 291767 10107233 ~ 10165397 (-)
G98216 NA non-coding upstream 357635 10173101 ~ 10222525 (-)
G97897 NA other downstream 453086 9353217 ~ 9355732 (-)
AMCG00015419 klc2,LOC107747958,LOC107728029,LOC106578016 other downstream 624412 9174843 ~ 9184406 (-)
AMCG00015415 NA other downstream 652371 9152218 ~ 9156447 (-)
AMCG00015409 NA other downstream 768677 9038596 ~ 9040141 (-)
AMCG00015400 NA other downstream 848674 8954513 ~ 8960144 (-)
G98094 NA other upstream 22036 9837502 ~ 9839510 (-)
AMCG00015471 NA other upstream 62993 9878459 ~ 9896512 (-)
AMCG00015468 NA other upstream 158490 9973956 ~ 9986628 (-)
AMCG00015479 NA other upstream 203298 10018764 ~ 10026019 (-)
AMCG00015497 NA other upstream 373376 10188842 ~ 10193858 (-)

Expression


Co-expression Network