AMCG00015862


Basic Information

Item Value
gene id AMCG00015862
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 25405391 ~ 25774014 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015862
ATGAGAATCAATGGGAGTCACCTCAACAGTACTTCCCTGGTCCCTCACGACGAGCTGGCATTGAACCGTCCTGCCTGGGTGGCGACCACTTTGGGGGGCTTTCTCATCTTCACCATCGTGGTTGATATTTTGGGGAACCTTTTGGTCATTTTCTCCGTTTACAGGAACAAGAAACTAAGGAATGCAGGAAACATATTTGTGagaaGAGGGATGCAGCAGCTAGATTTTGTCTCTAGCCACAGCTCTTATTTCTTCCACACAACAACTGTCCATGGCTGCGgtTGTGTGAATGTGGCAGTGCAAATACTGTGGCATGTCAGTATTGAGTGGAATCATAACCCGGTGGCCAGCTCTTCAAAGCGAGCGAAgTTTAAAACTCAGACAGCAAGGATGCAGCAGGGCCGGTACATTCTCATCTTCTACTTGCTGAGCTCCAGTGCTATGGGTGAGACCAGCTCCATGAGACATGATGAAGCCGTGGAGAATCTATCAGATACCACAGATCACATGACACACAATCGGGCCACAGACTGCCTGCAGATACCTTGGACAGAGGACCCTGCCCCTCCACAATCTCTCTTTGAACGCGGGCCACAGTCTCAGAAACTGCTGAGAGCCCTTCCACTCTACAAGACATCATGGCAGAGTTTCAGTCCAGTTGGAGCCACCCTGCTAAGGCCCACGTCCCAGCCAGGGCCGCGGATCCCCAAAACCTCTGCTGTCTCAACAGAAGCAGAGGGACAGAGGGCCTACACTGCAGGGGCTCAGGCAACGCACCTTCAGAGCACTAAAAGCCTGGTATCCCTCTACCTGGCTAGCTTGCTGGGCCGTGTTAACAGCATAGGCCACATAGGCTGCAGTGTTGGGCCTCTCGCCACCAGGGGGCCTCACCTTTTTTATGCTGGCTGGAGAGTGCTGATTGGGAAAGGCAACAGAGATGTCACTCAGGTGGTGCGGAGCTCTTGGATTGTGCTTGAGACGGGGCGGTTCAAATCCGAGTGGGGGCTGAGACCTGCACATGCTACATCGCTGAGCATGACCTCGGACTCCTCGCAGCACGCCGACATGTCGGAGCACGAGGCCGTGGATGTGTACAGAGACATTGACATGGCGTCGGCGTGGGGAACCTCGAAGTCCCCGCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015862 True 1146 mRNA 0.54 11 25405391 25774014

Neighbor

gene id symbol gene type direction distance location
AMCG00015844 frg1,LOC107656998,LOC107702291,LOC107554393,LOC107747397 coding downstream 787221 24605666 ~ 24618170 (-)
AMCG00015843 NA coding downstream 805127 24594299 ~ 24600264 (-)
AMCG00015841 NA coding downstream 851436 24543597 ~ 24553955 (-)
AMCG00015840 NA coding downstream 945113 24454436 ~ 24460278 (-)
AMCG00015839 NA coding downstream 1024922 24354563 ~ 24380469 (-)
AMCG00015856 NA coding upstream 20525 25794539 ~ 25812098 (-)
AMCG00015858 NA coding upstream 43221 25817235 ~ 25826561 (-)
AMCG00015860 NA coding upstream 73022 25847036 ~ 25980178 (-)
AMCG00015855 NA coding upstream 268130 26042144 ~ 26045985 (-)
AMCG00015859 NA coding upstream 278971 26052985 ~ 26055189 (-)
G101103 LOC107702333,LOC107746031 non-coding downstream 2894 25399982 ~ 25402497 (-)
G101045 NA non-coding downstream 661035 24744082 ~ 24744356 (-)
G101040 NA non-coding downstream 775608 24629564 ~ 24629783 (-)
G101036 NA non-coding downstream 785657 24619120 ~ 24619734 (-)
G101023 NA non-coding downstream 818392 24586485 ~ 24586999 (-)
G101181 NA non-coding upstream 221829 25995843 ~ 26045342 (-)
G101242 NA non-coding upstream 477109 26251123 ~ 26253246 (-)
G101249 NA non-coding upstream 490062 26264076 ~ 26264315 (-)
G101309 NA non-coding upstream 749645 26523659 ~ 26525730 (-)
G101317 NA non-coding upstream 800052 26574066 ~ 26574287 (-)
G101067 NA other downstream 404501 24992953 ~ 25000890 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other downstream 1658688 23743790 ~ 23746703 (-)
AMCG00015800 NA other downstream 2703142 22680694 ~ 22702249 (-)
AMCG00015761 herc3 other downstream 5125747 20227367 ~ 20279644 (-)
AMCG00015752 NA other downstream 5423834 19974956 ~ 19981557 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 2212741 27986755 ~ 27997677 (-)
AMCG00015891 wdr17 other upstream 2267549 28041563 ~ 28069876 (-)
G101456 NA other upstream 2387823 28161837 ~ 28257732 (-)
G101540 NA other upstream 3330215 29104229 ~ 29106160 (-)
AMCG00015936 med28,LOC107702388 other upstream 4389259 30163273 ~ 30168350 (-)

Expression


Co-expression Network