AMCG00015752


Basic Information

Item Value
gene id AMCG00015752
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19974956 ~ 19981557 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015752
TCCTCCAAAACCTTGGTCCCTGTGCTCCAGGCCCCCAAGGACTGTGGCTATGGCTTGGGGAAGAAGGATGGCAAGAACATCCTGACCATCCCCTACAGTGCCTGTGATGTTCGGATTGTGGAGAAGAGGTACATTATCCAGGTGGCTTACTTGACTAGTGGGGGAGAGCAAGCAGAGATCCAGGTATCCTGCCCCTATAAACGACCTGTGCCAAAGCAAGGATGCCAGATCCCCAAGAGCCAGCAGGTGTCTTGTGGTCCCAGGAGAACAGGCTCCAGAGCCTGCCTTGCACAGGGCTGCTGTGTAGACCCTGACACTGGCCTCTGCTACTATCCCCTGGAAGAATGCACTGCTGACCGGCACTTTGTCTTTGTGGTCCACCGCACCATCACTGTGCCCCATGTGGACCCTGCCTCCCTGGTGATTGCTGGCAACAAGTCCTGCATCCCGGTCATCTGCACAGCAGACTTTGCGGTCTTCAAGTTCCCCGTGACTGGCTGTGGAACCCATGCCTGCCCCAACCCCCTGGACTATGGTCACACATCTACCCTGCACATCCACCACAAGCAGCCACTGCCCAAACACCACCGTCGCTTTGAGATCCGCACCTTCCAGTTTATGGATGGCGTGACGCACCGCTACCTcaaggaggagATCTACTTCATGTGCTCCACGGAAGTCTGCTCCCCATCAGCCAAGAAGTGTGTGGAAGGATGCTTTGATGGGCGCAAAATCCCAGTGGTTGAGGACCCCAATGTGGATGAGCGCTGTACCAGGAAGCCTTGCCCAGGCAAGGCCAAAAGATCTGCAGACCTCGAAGCACCGTGATTGGGGCTGCAGTGGAACCTCTTGCTCTCTAGCTGCCTGGCAACAATGCAACTGTGACTTGAAATGCATATGGATTTGAATAAATGGTAAACCTGA
>TU125314
CAGCTGCCCCAACCCCCTGGACTATGGTCACACATCTACCCTGCACATCCACCACAAGCAGCCACTGCCCAAACACCACCGTCGCTTTGAGATCCGCACCTTCCAGTTTATGGATGGCGTGACGCACCGCTACCTcaaggaggagATCTACTTCATGTGCTCCACGGAAGTCTGCTCCCCATCAGCCAAGAAGTGTGTGGAAGGATGCTTTGATGGGCGCAAAATCCCAGTGGTTGAGGACCCCAATGTGGATGAGCGCTGTACCAGGAAGCCTTGCCCAGGCAAGGCCAAAAGATCTGCAGACCTCGAAGCACCGTGATTGGGGCTGCAGTGGAACCTCTTGCTCTCTAGCTGCCTGGCAACAATGCAACTGTGACTTGAAATGCATATGGATTTGAATAAATGGTAAACCTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015752 True 924 mRNA 0.55 8 19974956 19981557
TU125314 False 415 TUCP 0.54 4 19974956 19976069

Neighbor

gene id symbol gene type direction distance location
AMCG00015753 LOC108275807,LOC108441536 coding downstream 29656 19932285 ~ 19945300 (-)
AMCG00015750 NA coding downstream 46429 19927382 ~ 19928527 (-)
AMCG00015749 NA coding downstream 64806 19907639 ~ 19910150 (-)
AMCG00015743 znf330,zn330,LOC107746098 coding downstream 214801 19747264 ~ 19760155 (-)
AMCG00015740 NA coding downstream 715834 19239310 ~ 19259122 (-)
AMCG00015751 NA coding upstream 14612 19996169 ~ 20010622 (-)
AMCG00015755 NA coding upstream 133736 20115293 ~ 20122414 (-)
AMCG00015763 NA coding upstream 331573 20313130 ~ 20340896 (-)
AMCG00015762 NA coding upstream 360186 20341743 ~ 20363462 (-)
AMCG00015760 NA coding upstream 465543 20447100 ~ 20469761 (-)
G100297 NA non-coding downstream 48854 19925802 ~ 19926102 (-)
G100267 NA non-coding downstream 130212 19839374 ~ 19844744 (-)
G100261 rnf150,LOC107703843,LOC107746087 non-coding downstream 172731 19801976 ~ 19802225 (-)
G100257 LOC104962440 non-coding downstream 234755 19721668 ~ 19740201 (-)
G100233 NA non-coding downstream 261740 19712927 ~ 19713216 (-)
G100381 NA non-coding upstream 11683 19993240 ~ 19995630 (-)
G100385 NA non-coding upstream 114324 20095881 ~ 20100083 (-)
G100391 LOC100846954 non-coding upstream 171629 20153186 ~ 20153634 (-)
G100416 NA non-coding upstream 325494 20307051 ~ 20309103 (-)
G100468 NA non-coding upstream 795063 20776620 ~ 20776836 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 1344291 18627605 ~ 18630665 (-)
G99939 NA other downstream 2137014 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 3363512 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 3439488 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 3501779 16467299 ~ 16473177 (-)
AMCG00015761 herc3 other upstream 245810 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 2699137 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 3762233 23743790 ~ 23746703 (-)
G101067 NA other upstream 5011396 24992953 ~ 25000890 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 8005198 27986755 ~ 27997677 (-)

Expression


Co-expression Network