AMCG00015760


Basic Information

Item Value
gene id AMCG00015760
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 20447100 ~ 20469761 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015760
CTGAAGGCTATAGTCATTTACTATGAATGCGTGTTGAAATAATGATCAGTTAAAGGAAAGGGCACACCGacggtgaaaaaacaaactttcaGTGTGATTTCCAGCTGCAGCTTACAGGACTCGGTGACAAGCGTTTCTGCACACTGCTTGGCAATCCGGTGATGTCATCGGTCATGGATGGCCCGGTGTGGCTGGTGCAGGTTTCCACGGACGGGGCAGTGAGAGTGAACCCCGCAGCGCTGGGCACCCTGGATGCGATCTCCCCGCCCCTTCAAGTCATCAGCATTTTTGGGCCCCGGCAGACTGGGAAATCACACCTCCTCAACTGCCTGGCAGGGAGAACAGgATTTACTGTCTCAAATGACACCTCTCCCAAAGATCCAGGCATTAAGATGTGGTGCCTGCCTAACCCTCTAGACAAAAAACAGACCCTCATATTACTGGACACAGAAGGCTTTGAAGAAGACTGGGCTGTTGGTGAGGCCTGCTGCCCCATATTCATCCTGTCAGTGCTGCTCAGCTCTGTCTTCCTGTACAACACTCAGGGCCCTATCACATGCGAGGTCCTCAACAAGCTGCTTCATGTGGTCGCCTTGCCCAATCAGGTTCAACTTCCTTCCAGTGACTGGCCCAGCGAGAGTTTCCTGCTGTCTGGGGTGCTTCCTGCCTTCATGTGGTGTGTGCGAGACGTTGCCTTGGAAATGGAAATAGATGGAATCGAGCTGCTGCCTAATGATTACTTAGCCTCCATTTTAAATGAAGGAAGAGATGACGATGAGTCTCCAACCTCCATGATCCAGAGACTCTTCCCTAGCCAGAAGCTCTTTAATTTCTGCCTTACACATGGCAGTGGCAAAGACATCGAGAAACTCCCCCACAGACAGCTCAGTTCTTGTTTTATGGATCAGGTAGAGGTCTTAAAAACAGACTTGCTCCGAAGTGAGCCAAAGACCTTCATGGACGCTGCGTACATCAGTGGGAAAGagcTGCGGGTGATGCTGGAGCATTTTGCTGATAATTTGACTAGAAATTCTGTGATCTGGCTGAacaaggagaaggaggagattGAGTTGATGGCCCAACTGTCCATAGGAGAAATGGAGTCCCCCATGGATTGGGACTGCTTTCACACAGAGGCTGTGGTGGAAAGTCCTTCATCAATACCTCATCAAAGCTTGGATCCACCCCCAAGAGTACAGGATCAGCCTAGAAAACAGCCTCTATTGGTCAGGACCTCCTTGaAGGGCCCTGTGGAGATGCCTGCCCCTGTGTGTCTCATTGAAAACACAAAGGGAAATGAACTGAAAGTCAACCAGGAGGCTGTGGATATATTGAATGCCACAGAGCAGCCGGTGGTAGTGGTGGCCATCGTTGGCTTGTACCGCACTGGCAAGTCCTACCTGATGAACAAGCTGGCGGCAAAGCAGACAGGTTTCTCTCTTGGAGCGACAATCCAATCCCACACAAAGGGCATCTGGATGTGGTGTGTTCCTCACCCCTGCAGGGACAACTGCACATTGGTCCTACTGGACACAGAAGGACTGGGAGATGTGGAAAAGGTTCGTGTGGAAGGCGAGTATGATTTGTTTTGCAACGAGAATACAGCGCTCTCCCAAGATCGCTGCACTGCTGTCCTAATACAGCTTGAAGATCAGCAGGAAGAGGATGATTACCTAAAGCCTGGAGGTTACAGAGATTACAGGGACAATCTGGATAATCTGATCCAGCAGTACAAAGAGACGCCTGGCAAAGGGACACAGgctGCATGTGTTTTGGAAGAGTATCTGAAGCGCAAAGAAGATCTGGGAAGAAACATTCTTATGGCAGACCATGCTTTAACAGAACAGGATAGACGTATCAAAGAAGAGGAAGCGAGAGTTGAGATGGAGAAATATAAGGCAGAAGTTGCCAGACAACAGGAAGAAATGCTGAAGCAAAGGCTTGAAGACAAGGACAGAGCCTACAGAGAGAATGAGAAGCAGCTGAGGGAGAAAATGGAGAATGACAGGAGAGCAGCCCTGGACGAACACAACAGGATCCTTGACCGGAAACTGAAGGAGCAGAAAGCCCTTATAATGGAGGGATTCCAGGACAAGGCTTCGAGGATGGAATCTGAAATGAAATCCCTCAGGAGGCAGGTGCAGCAGCAGTCAAAAGGAAGCTCTGGATGGAATTGCTCAATATCTTAGAAAGAGGGGTCTCTTGTATGCTACCTGGATTATGTGGAAATATTTTGGTGATACAGCCAGTTTCTCACTGACTTGAAAGTGTTACATCAGGAGAGATCATGGTTCCTCTTTTAATTGCCAGTGCTGACATCactcatacattttaatttatatagatatatacagctctggaaaaaattaagagaccattgcAAAATTATccgtttctctggttttactatttataggtatgtgtttgggtaaaatgaacattttagcTTTATTTATGAACTACTGACAAAAtgtctcccaaattccaaatagaaatatgaatggaatggaatggctgccatacatgtagagatgctgatttaagaaaaatttgcagtggtctcttaatttgttccagagctgtattttcgCTGGAAGCATTTAACTTCCAACACAAGCTGCTTTCAGGACATAAAGAGCAGACCTTTTTACACCTATCAAAtatgatttgaaatatttagtCTACCAAAAACAGACTAATGAGATGCTATTATTGTGAAAGGACTAATGTGCAGGATTGCCCTCTAAATTTGACAAATTCAGAAAGATTTATGATTTCACaacaatcaatatttatttatttttattattattattaattattaatttgtcagACACCATTATCTAATCTGTCTTGCAAGGTTATATTTTAGTCGGACAGAGTTTCCTTGGCTTGCCAGGTGCCTGTGATATTATTTCTCCCTGTGCTGTTTGTTTATACCTTAGAAGTGTGAGAAGAAGCCTGAGCAACAATTCATATGTATACTGCATCTCTATGTAAAATCGTATTAGTATTTGGTTATGTTCCCagatatcaatttattttagagGGAAAAAGATAAAGCAGGGTGTTGAGGGCCTAATGTCCAGGTATATTTCTCACAGCCAAGCTTGCCTTAAAACAATCTCCTCTGCCCGTATTACAGCCTTTCACtcctgaaacacaaaaacattctcCTTCCAGGATCCGCTgagaaaatgaagagaaaataatcagGGTTTACTAACAATAACCTACTTTTACTCGTACTCCACTCTTTGCAGAGTTTAGGACGAGGCTTCAATACTGTGATTAGTACAAATGAAGCCAGGTGAAACCAGTCACCCATAAAGTCACCTTTATGCCAGCAACATACGTCCTGAGTCTTGAACAACACCCCACACCCaggcatatatacatatttatctatctatgtatagTTCCTCCCACTTCACAAATACATGCTGCTTGGGTTCATCGGCTACTTGAAACTGCCCTTTAGTCTTGGGTGTGTGTAACATTGATGATTTGGTGTCCTGTCATGTAccctgccttgcgccctgtACCTACTCACTCAGCTCACTCTGACCCTGTTCCAAATGAAGAtgttattgaaaatgaatggacGGATGTATCTAATCTGTAAAATGACACACtcaagttcagttcagttcagttaagCAAGTTTGGATTTAACTGTTTAAACATCATCTAAAAAGATGAAAAGCaacaatattttacacaaataacaaacatttgACTAAGGCAAACTGATCCATACAGATGTCAAATGTTTAGGCAGCCTGCCACAGATCTTTCCAATGTACACAACTGCTAATGCAAGCTTATGACAGACATCTATACAAGTATAGAATGGTTTACTATTTCTTTTTAGCTAATGACTATAAGCATTTAGTAGTGTTTTATGAGTATAATGTTACCTAGATCTGCATCATGTTTTATTGGCTTCACTGagtgttttggttttctttaaaaatttagtttattttgtgtctttatctGCACTCAGTCTCTGAGACTCACACAGCATGTGACTGAATAGAAGTGATTgtagtattttctttatttgctttcatattttatgttgACCTGTTGATCGCATTGTATGAAAAAAGCAGTGAAAGagtttggcttttttttttttaagaaaaccacaGTCTATGAAGTTAACAATCACATTAAGAGATAACTGTGTTCCTTGTGTTagacacagtttaatttaatttgttccttCCAGCATGTTTACATTCCAGTGTGGATTCTTGCCTTCACTCTGAttataattcagtttattttttctggtaacCTAGCCCGAATATCTTGTCAAAGACAGATCTAAGAAAGGTACTTCTCAATGTAATCAGTATGACTGTGTGcaagttttttaaattttttaaaatattgttctcacaagtgaaatataaaacagCATCACACAATCAggctggttttatttatttttgtattgatttttaactGCGTAGGTTATGGTGATATGGTCGGTGAGCTACACTCATTTATCAGCCTTTTCTAACATGCATTTCTTATAACTTGATATTCACATTTCTTAaactgctacacacacacacacacacacacacacaaagccctGTTACATCTATTACCCCCTTTTAGCGCCTACTCAAAATCCGCCTGTTCGGTGTTCACTTATTGGTCCTGCATAGGTATATTGGGAGAGGTGAAGAACTGGTATAAATCTTCTATATTAATAtaagcattagaaataatagcatgtatacaAACCTAGCAAATTGGATTTATCAAGCTAGCAAAAAGCTAACAACTCAGTTGTTAAAGGTACATCCTCTAGACATTCCTCTATCCGctttcacttctgtttttctatgatAAGAGAACAACCCATACATGTACAGCCCACAGGTTTCTGCCCGTTTGCTTAGTGTCCATTTGTGGATTTCCTATTCTTCTTTCAAAGCTgaagatgttacctcattgtccatCATTAAAGAAAACCGTGAGACCAGCAGTTTTTATGCTGTAACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015760 True 5027 mRNA 0.42 14 20447100 20469761

Neighbor

gene id symbol gene type direction distance location
AMCG00015762 NA coding downstream 83638 20341743 ~ 20363462 (-)
AMCG00015763 NA coding downstream 106204 20313130 ~ 20340896 (-)
AMCG00015755 NA coding downstream 324686 20115293 ~ 20122414 (-)
AMCG00015751 NA coding downstream 436478 19996169 ~ 20010622 (-)
AMCG00015753 LOC108275807,LOC108441536 coding downstream 501800 19932285 ~ 19945300 (-)
AMCG00015764 NA coding upstream 13809 20483570 ~ 20484280 (-)
AMCG00015772 NA coding upstream 16943 20486704 ~ 20586968 (-)
AMCG00015769 emx1,LOC106611434,LOC108246069,LOC103150078 coding upstream 218110 20687871 ~ 20697635 (-)
AMCG00015771 NA coding upstream 245194 20714955 ~ 20717677 (-)
AMCG00015770 NA coding upstream 258225 20727986 ~ 20729095 (-)
G100416 NA non-coding downstream 137997 20307051 ~ 20309103 (-)
G100391 LOC100846954 non-coding downstream 293466 20153186 ~ 20153634 (-)
G100385 NA non-coding downstream 347017 20095881 ~ 20100083 (-)
G100381 NA non-coding downstream 451470 19993240 ~ 19995630 (-)
G100297 NA non-coding downstream 520998 19925802 ~ 19926102 (-)
G100468 NA non-coding upstream 306859 20776620 ~ 20776836 (-)
G100535 NA non-coding upstream 834273 21304034 ~ 21310751 (-)
G100554 NA non-coding upstream 948914 21418675 ~ 21502989 (-)
G100555 NA non-coding upstream 977390 21447151 ~ 21509487 (-)
G100556 NA non-coding upstream 981308 21451069 ~ 21457293 (-)
AMCG00015761 herc3 other downstream 167456 20227367 ~ 20279644 (-)
AMCG00015752 NA other downstream 465543 19974956 ~ 19981557 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 1816435 18627605 ~ 18630665 (-)
G99939 NA other downstream 2609158 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 3835656 16592228 ~ 16611444 (-)
AMCG00015800 NA other upstream 2210933 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 3274029 23743790 ~ 23746703 (-)
G101067 NA other upstream 4523192 24992953 ~ 25000890 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 7516994 27986755 ~ 27997677 (-)
AMCG00015891 wdr17 other upstream 7571802 28041563 ~ 28069876 (-)

Expression


Co-expression Network