AMCG00015691


Basic Information

Item Value
gene id AMCG00015691
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16524114 ~ 16535468 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015691
ATGTGCAGGGTCGTGCAGGACAGTGGAGATGTCGTCCAGATGCTTGCAGAGCTACAGGGAGCGCTGCCAAGAGTTCggtgtCGAGGTGGTGTGGGAGGGCAGAGGTATGTGACGCTGGTGTTCCCCCCACCTCTGAAGGCTCTGCTGCGCTGTGTCTTCCCTGGGGAGTTGTGTGACTACCCCGACCCCACCCACCCCAGGTGCATCTCCGACTTCTTCCCACGCTTCCACACCTTCCCCtgcccccctccacccccacgcccccccccccagcctcaggaacagggggagaggggggggcagtgtgaggaggaggaggaggaggagagggagaaggagaaggagaagcagagggagagagagagggagaaggagtctgagggagagggagacgaGGAGGGATACGATTCTGATGAAGcaaGTGAACAGATGTCTCTGgctaaCAAGCTCCGCACGAAGACCCTGCGGAACACTCTGAACCCGGTGTGGGGAGAGACACTGACCTATCATGGCATCACAGCCTGTGACATGAGCACTCGGACACTGaggctgtgtgtatgtgacaTGGACCGGCTGGGCAGGAACGAGCTCATAGGAGAAACCCTGGGGAAGAAGTCAGGCACAGTGAATGTGGAGCGAGGCATGGCGCTCTATGAGGAGGAGgcagtgCTCACCGACTCAGCAGCAGACAGGGGCAGAGTGCTGCTGTCTCTGTGCTACTCAAGTCAGCAGGGGGCGCTGTGTGTGGGGCTAATCCGCTGTGTGCACCTAGCCGCCATGGACGCCAATGGCTACTCCGATCCCTTCGTCAaggtgtaa
>TU124562
AAGGGTATCTGTGTTTAGTTAACTTTAAGAGAGTATTAACATCGAATCGCATCGAGCTGAACACATGGGGAAAAACTACTGACAACGATCCCGACTTCCGCCAGACTGACCCCGCTGACCCCGTGACGTCACAAACTCGTTGTGCTGGCAGGAGTGCGCGGGAGTCGGACCCGTGTGGATGTGCAGTGTGTAGGGTCGTGCAGGACAGTGGAGATGTCGTCCAGATGCTTGCAGAGCTACAGGGAGCGCTGCCAAGAGTTCggtgtcCCTCAGTGGGTGGCAGTGCTGCTGTCCATCGCCTCACAGCAGAAGAgcaacagagagagacgcaggAGAGCTTACAGACTCATCTGTCGCATTTTGtgtCGAGGTGGTGTGGGAGGGCAGAGGTATGTGACGCTGGTGTTCCCCCCACCTCTGAAGGCTCTGCTGCGCTGTGTCTTCCCTGGGGAGTTGTGTGACTACCCCGACCCCACCCACCCCAGGGTGATTCACGTGACTCTGGCTGACCTTCTCCGCATGAGCCTGGAGGACTGAGGTGTCCCATGATGCACTGCAGGGCCACAGATGCACAGGAGGGCTGATACACTGCTGTTAATGTTACTGTTACTGATGTAGTTCGTGTTAATACTGTTAAAGTTATGCTTCTTCCTGTTCATATAGCAATTGTTCAGTCCGTATCAACACTACCCTGAATCCCTgtttccctctgtctctctgctgttGTTTCACAAGTCAGATAATGTGGCTTTGTTTAATATTCAGACAGGGTTCAGCGTAATAAAGCAGGCGTGCTGCTCTGACCAGGCTGTTGTGTTCTTACAAAAAGAGCAGGTTTACAATGACTCTgctgtctctcttctctctctctccctccccccctctctctcaatgcagtgttaatgtattttagtgTCCAGTCcttcagacagtcagtgtgtctatTTTAACTGCCCCCCTGTATCTTTACTTttgaggaaaacatttttttttcgcTGTAGtttgactttttatttgtgttctctTTTTTGTTCACTGCACTGCAGTACCCCCTCCCTCAGTTATTCTGGTATTGTGCTGACAGAGCACAGGTGAGCACAAtacctgagaaagagagagaggagaaagaaagaaagaaagaaagaaagagggggggactgtacagggagagagacagaggggtgGGTGGttgtagagggagagagagtgagagagttcATAGAGGCACACTGAGCACTGAGAAAGGTGAAGGGTTAATTCAGAACCCACTGACTGAACATTGAAATACAGTAACACTGAGAGGGCAAATGACAGAAAGATGGATGGAGGAGGTGTAGAGGTCTCTCAGTTATTCTGGTATTGTGCTGACTGCACAGGTGAGCAGAACACCTGacaaaaagagagggaggaagaggggggtgGCAGAGAGACTGTGTGAATGTAGAGAAGCACAGgagtatgagagagagagagagagactgggtggacactgcagtacagtaacactgcgctgagagagagttaatacagtacagactcCGAGTACACTAGAGTACAGTAACACtgcgctgagagagagagaaaaggagagagggatggaggacAAAAGGAATTTGAAAGGACGCGCCGTTATTGAGgtcgagggagggaggggtagggggaggagagagtgagggggagagagaaggagagagaaggagagaagacAGTCAGTTGAGTTCAGTGCTCTGGtctgtgttgctgtgctgtTACACTCTGACGGAAGAGAGAAGGATTAGGAGGATTGTTCAATGTCATACAGTGACACTGGGTATGttatctgtgtgagtgtgtaagagtgaatgtgttttgtgtgtatctgtgtcggtgcatctgttttgtgtctgtgtgtctttgtcagtgtgtgtttattatattgcatttgtgtgtgtgtgagtgatagTGTGTCAATATCGTTGTGTTTCtttgtgaaactgaaaactgttgtAAAAACAGaccatctatctatctgtcttaTCTATATATCGTTTATTTATgtaggtatgtatttatttatttattttctcttccagGTGACCTACAGATCTACAATAacctgagagacagacagacacacacaaacacacacattacataatGAAAAACTGactacagtccagtacagagatagggagagaaagggggctgagagggggaggaagaggtgTAGACTTATTGAGGGGTGTACATAATTGGACATGTtacaaagcaaaccaaaataGAACATCTAATTAATAAGTCGTTAGACTAATGGCGCAATTAGACTGACgtcagagacagggagagaggaggagggaaggGGGACAGTGGGTGAGAGGAAGCAAGAGGTGGACAAAAAGAGACAGGGAGGAAgtagagagagaagaggagtgGGCGAGAGGGGAGAGGGACAATACAGATTAATTGGACACTGCAGTATATTAACACTgcccagagagagacagatacactCTCCGACAGATAGACAAACAAGGGGAGAAATGTAGAACAAATATGCTTtcactgtctctccctctgacagagagagagacaggaagcaGGTTaacataatacagtacagatcagactgactgagacactgactgaaACTGCACAGGTCTCTGTTTGactgtctgtctctatctctctttctgtgtgtctgtctgtttgtctctctgtgtgtttccctctttgtgtgtgtgtgtgtgtctctttacctgtctgtgtgtctttctgtctctgtctgtgggtgtatctctgtccctgtctgtgtgtgcgtctctctgtccctgtttGTGGgtgtctctctgtcactgtctgtgtgtgtctctctgtcactgtctgtgtgtgcgtctctctgtccctgtctgtgtgcgcgtctctctgtccctgtctgtgtctctctttgtccctgtctgtgtgtctctctgtccctgtctgtgtgtgcgtctctctgtccctgtctgtgtgtgtctcactgaccctgtctgtgtgtgtctctgtccttGTCTGTGTGCgcgtctctctgtccctgtctgtgtgtgcgtctctctgtccctgtctgtgtgtgtgtctctctgtcactgtctgtgtgtgcgtctctctgttactgtctgtgtgtgtctctcggtccctgtctgtgtgtgtgtctctctgtccctgtctgggTGGGTGTTTTTCCTccgtgtctcagtgtgtctctgtgttggaGATGAGTGTCCAGAGATCCTCTAAGATCAGTATCCAGGAGCACATGGCCATCAATGTGTGTCCCGGGCCCATCCGCCCCATACAGTGCATCTCCGACTTCTTCCCACGCTTCCACACCTTCCCCtgcccccctccacccccacgcccccccccccagcctcaggaacagggggagaggggggggcagtgtgaggaggaggaggaggaggagagggagaaggagaaggagaagcagagggagagagagaggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015691 False 819 mRNA 0.60 9 16524114 16535290
TU124562 True 3480 TUCP 0.49 5 16529377 16535468

Neighbor

gene id symbol gene type direction distance location
AMCG00015683 NA coding downstream 60174 16460722 ~ 16463940 (-)
AMCG00015680 NA coding downstream 75927 16445972 ~ 16448187 (-)
AMCG00015677 NA coding downstream 199587 16315488 ~ 16324527 (-)
AMCG00015676 NA coding downstream 251467 16252419 ~ 16272647 (-)
AMCG00015672 NA coding downstream 464113 16057802 ~ 16060001 (-)
AMCG00015690 NA coding upstream 1079 16536547 ~ 16546886 (-)
AMCG00015695 NA coding upstream 39790 16575258 ~ 16579210 (-)
AMCG00015696 NA coding upstream 46227 16581695 ~ 16590999 (-)
AMCG00015697 NA coding upstream 80145 16615613 ~ 16650920 (-)
AMCG00015693 NA coding upstream 115730 16651198 ~ 16677591 (-)
G99735 NA non-coding downstream 25583 16497485 ~ 16498531 (-)
G99724 NA non-coding downstream 95488 16424750 ~ 16428626 (-)
G99679 NA non-coding downstream 212144 16311708 ~ 16311970 (-)
G99623 NA non-coding downstream 393819 16130064 ~ 16130295 (-)
G99614 NA non-coding downstream 455985 16060196 ~ 16068129 (-)
G99758 NA non-coding upstream 25117 16560585 ~ 16572276 (-)
G99777 NA non-coding upstream 63625 16599093 ~ 16600378 (-)
G99804 NA non-coding upstream 178979 16714447 ~ 16714835 (-)
G99816 NA non-coding upstream 335174 16870642 ~ 16871119 (-)
G99830 NA non-coding upstream 466526 17001994 ~ 17004413 (-)
AMCG00015681 NA other downstream 50937 16467299 ~ 16473177 (-)
G99646 NA other downstream 301959 16221765 ~ 16222155 (-)
G99605 NA other downstream 421658 16017583 ~ 16102456 (-)
AMCG00015666 NA other downstream 820824 15687642 ~ 15703290 (-)
G99454 NA other downstream 1263630 15259461 ~ 15260484 (-)
AMCG00015694 NA other upstream 56760 16592228 ~ 16611444 (-)
G99939 NA other upstream 1302112 17837580 ~ 17837942 (-)
AMCG00015723 lsm6,LOC106610200 other upstream 2092137 18627605 ~ 18630665 (-)
AMCG00015752 NA other upstream 3439488 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 3691899 20227367 ~ 20279644 (-)

Expression


Co-expression Network