G99830


Basic Information

Item Value
gene id G99830
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 17001994 ~ 17004413 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124706
NNcattaatgagaaattgaacaggtgttcctaataatcctttaggtgtgtgtataatgcaccaaatacaaattataatagtgatttatatttcttttgtaCCTATTGCCTTTTGGCATTTCAAAGAGGGGATGACTTATGAAGTATCCATAAGTCCTTGGGATGCGAGTCTGAGTCATGAGTCATTGGAGGTAAACAAtatcaaacaaatgcaaatgctaCTACCAGCACCAATGATCATAAGATTAACAATGGCAATAATATAAAGAATGTGATTTAAGTCACAGGGGTCACAATTTGTTTTACAGCTGAATAGATAAAAACTTTATGTCACAATGAACCATAAAGCTTTATTAAATCCAGAGAAAGTTTGTTCACTTGAACATGTTACAAGGTTTGGCTTATAATATAACATCAGACAAACAATGCAGTGAATCAGAATTAtaacaacattttcagaaaagtgTTTAGCTACAATGTTAAAATCAGTCAGATTTAATATGTCAAGCTACTTATTTCAAATCTGCATCATGACACAATAACATccttcattcaaataaataggTTTCGTTTTCTAATCAGAGTACATGGAGttaatgacaaattaaattatatgacTCCAGACCTAACTTACCAAATTGGATGAATATGTGAAAGATGCCTGTAAAAGTTAGATGTTGACCCCAGGTTGTCTTTGATCTTCAAAAGATTTTGAAAGTGCTGCATTTGATACATAATTGATATAGTGAGAGAGGCTGCCTTGCTTGTTATTAAGGTGATTCTCGCCTTTCCCAGAGCCACTGCTTCACAACATCTATTGGCACTGATATTACTGCAAAAAACATATGCATGCTTGTAGTCTGTTGCAATTGTACTCCAAGTCTGAGTGATGAAAAACACAAGTCAAGCAAACATGGTTGTTGGGTCCAAACAGCTGGAAATGTAGTCCATCCGATAAAGGACATAAGAACTCAAGCTGTCATTTATCAGCAAAAGTATGATTATTTGCacatattttaatgcatgtgTCCTTTGAGGACACCATTTCTCAATGCATTCATGTTTCTGAGTACTTAAAACAAATCTTGCAGTTTACTAATGAGCCTGCATGTAAAAAGAGAGGGGATCTGTTGTGCAAGTATAAGTAAACTGAACCCTGCCATGTAAAATGTACTTGGAAATCTCAGTTGAGAGTAAATATGCGGAACTAAGTGGGCAATTCAAACTGCCTTAAATGCCTTAAATCTAACTAATGGTGATTTGGATGGCCTGTAATTGGCTTTAAGAAGGCTAAGAAAGCCTCCATGGAAGTTTATTTGGGTTGGTCTGTACGATATTGAATGCATTTGGGGTTTCATGATTTATGCGTAAGCCTTATTTTAGTACTATTTGCACATGTATATTtgtagaaaaatgaaaaatcctatgcaaaatatacatattattggGGAGAGTTTAcgatatttaatttcaaagatGGGGAagggtatttaaatgttttagtattttaaagaaaccaatcaaaatgacttatgttgattttatttttcacagaaacaaatacttaaaattaTACTACTAAATAAGAACATTGATGATCATGTTGATCAAATGTTATGTGTTAATTCCCTTAAGTCTGGTATTGGTGGGGGTCTGCCTTGATGGACTGGAATTTCATTTATATACTGAAGCAGTTTAACGGGCTGTAAATGTTAGTATTTCACAAAATCATATCAGACTAACAGATATGTAAAATCATTGGCAAAGACATTCCAGAAGGTCACATTAGTCGCCTTGAttttgtgaattattattatgaggtccattgaatgttttaaaggaaaatatatttagctaCATGTTTGTATtgggaaatgtttgtttttcctttataatATTCAGTCACCTCCTTTTTGATCAGTCACCTCTTTTATTCTTCCGTTGCCTACTATCAGCACCATACTGTTGATCAATTTGAGCACAGTTGTATTAATACTGGTGCCATCAGCTCTAACCTTGTTGTTTGGTGCTGGAGAAAAAACTGTGCTAAATGATTAATGCAATCATAAAATCTTGTAATAAgccatttgttgttgttattattattattattattattattatttggtatcCTTTTCAACTAATAATGGAACAGCTCTGAGGAAGGTTTCTGGAAGAAATGGATGGCTGTGCAAacaacagcatttgtttttaatataatatatatatttaccacaTTTTGCACTACCTAGCAACAGGTACTTTAGTGTAGCAATGTTTAATTCccttcaaattattatttatgctcCCTTTCCAATGGCCGTTGCTATAATATGCATTAGAAACTGGTGACCTGAACTTCTGTACATCTCTGATATCAATAATGTCTCTGAAACCACAAAAATGTATCCAATAAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124706 True 2420 lncRNA 0.33 1 17001994 17004413

Neighbor

gene id symbol gene type direction distance location
AMCG00015693 NA coding downstream 324403 16651198 ~ 16677591 (-)
AMCG00015697 NA coding downstream 351074 16615613 ~ 16650920 (-)
AMCG00015696 NA coding downstream 410995 16581695 ~ 16590999 (-)
AMCG00015695 NA coding downstream 422784 16575258 ~ 16579210 (-)
AMCG00015690 NA coding downstream 455108 16536547 ~ 16546886 (-)
AMCG00015702 NA coding upstream 1709 17006122 ~ 17018382 (-)
AMCG00015704 rps3a,rs3a coding upstream 123494 17127907 ~ 17131775 (-)
AMCG00015712 mab21l2 coding upstream 327239 17331652 ~ 17332731 (-)
AMCG00015711 NA coding upstream 332920 17337333 ~ 17488602 (-)
AMCG00015713 NA coding upstream 518866 17523279 ~ 17547496 (-)
G99816 NA non-coding downstream 130875 16870642 ~ 16871119 (-)
G99804 NA non-coding downstream 287159 16714447 ~ 16714835 (-)
G99777 NA non-coding downstream 401616 16599093 ~ 16600378 (-)
G99758 NA non-coding downstream 429718 16560585 ~ 16572276 (-)
G99710 NA non-coding downstream 474067 16503791 ~ 16527927 (-)
G99860 NA non-coding upstream 130514 17134927 ~ 17135183 (-)
G99923 NA non-coding upstream 643638 17648051 ~ 17704580 (-)
G99936 NA non-coding upstream 792896 17797309 ~ 17799497 (-)
G99937 NA non-coding upstream 797745 17802158 ~ 17803919 (-)
G99941 NA non-coding upstream 900624 17905037 ~ 17905456 (-)
AMCG00015694 NA other downstream 390550 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 466526 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 528817 16467299 ~ 16473177 (-)
G99646 NA other downstream 779839 16221765 ~ 16222155 (-)
G99605 NA other downstream 899538 16017583 ~ 16102456 (-)
G99939 NA other upstream 833167 17837580 ~ 17837942 (-)
AMCG00015723 lsm6,LOC106610200 other upstream 1623192 18627605 ~ 18630665 (-)
AMCG00015752 NA other upstream 2970543 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 3222954 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 5676281 22680694 ~ 22702249 (-)

Expression


Co-expression Network