AMCG00015695


Basic Information

Item Value
gene id AMCG00015695
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16575258 ~ 16579210 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015695
CAGCGCCAGGCCCCTTCCGCGCAGTCGCAGATGATGCCGTGTGTGGAGGGTCTGTGTCGCGGTGCACGCCGGGAGAAGGGAAGGCGCTCTGAAAGCGGCCGGGCAGGAAGCGGTCGGggttgtttacattttaatttatttattgttttttttttttttttcttttttttttttttgggaaacaaacacacatatgtgtataaataaagataCATAAAGAGACGCGTAGTATATTTGAGTGGACTGAGCGAATCGGCAACAGGAAGAGCGGCAGGAGATCGTACCACCGGCCGACATCGCTGCCCTCTGAGAGGGAGACCGTGCAGCCGGTGACCGGGGGGTCTGGGCACGACACCCGCAACTCTGGTGTCAGTCCGACAGTAACCGCTGCAGTGATACGGTTACAGCAGCCGGAGCGGCGTGGTCAGACCCTCCCCCCGTGAGTGAAGCCCATCTTGCTCTGTTTTCCGGGTCGAGGGAGAGAGTCGACAGAGACAGCCGGGGGCTTCTGTCCGTCCGCAGCCCCTCCCGTGTCCGTCAGTCAGACCGATAGCCGGGCTCTCGGTCATTCTGTGTGTAATCTGCGGGATTATCGCTCTGTAAACCGCGGGGTTTAACTTCTCCCCCTGGCCGGTAACCAGAGAGAAGAGACGGACACACCGAGGACAAGATGAGCTACAAACCCATCGCTCCCGCACCGACTGCAGCCAATCACACCCCGCCCGgTTCCAGTgtgtcctctccctcctcctctctcggCTCCTCCAGCTACAGGCCGCTCTTTAATGACTTCGGTCCACCGTCCATGGGCTACGTGCAGTGTTCAGTCTCTCAccatgtctctgtgtctcagtcccTAAAGCCAGTGGGCTCCCAGCAGTCCCAGTCCACATACGCTGACCTGCTGTCTGTGATTGAGGAGATGGGCAAAGAGATCCGGCCAACATACGCAGGCAGCAAAAGCGCCATGGAGCGGCTGAAGAGAGgtattATTCACGCTCGGGCTTTGGTGAGAGAGTGTTTGGCTGAGACAGAAAGAAATGCCAGAACATAACAGCCATCCCCGTCCTCTCCCcagctttccttttcttctcttgAGGAAGACTGCTCTGTCAGCCCTgatcacattttataaaatcaatgttttttttcagtaacttaaataaatcattttttcaattaaaataa

Function

GO:

id name namespace
GO:0044428 obsolete nuclear part cellular_component
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0043227 membrane-bounded organelle cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015695 True 1188 mRNA 0.54 4 16575258 16579210

Neighbor

gene id symbol gene type direction distance location
AMCG00015690 NA coding downstream 28372 16536547 ~ 16546886 (-)
AMCG00015683 NA coding downstream 111318 16460722 ~ 16463940 (-)
AMCG00015680 NA coding downstream 127071 16445972 ~ 16448187 (-)
AMCG00015677 NA coding downstream 250731 16315488 ~ 16324527 (-)
AMCG00015676 NA coding downstream 302611 16252419 ~ 16272647 (-)
AMCG00015696 NA coding upstream 2485 16581695 ~ 16590999 (-)
AMCG00015697 NA coding upstream 36403 16615613 ~ 16650920 (-)
AMCG00015693 NA coding upstream 71988 16651198 ~ 16677591 (-)
AMCG00015702 NA coding upstream 426912 17006122 ~ 17018382 (-)
AMCG00015704 rps3a,rs3a coding upstream 548697 17127907 ~ 17131775 (-)
G99758 NA non-coding downstream 2982 16560585 ~ 16572276 (-)
G99710 NA non-coding downstream 47331 16503791 ~ 16527927 (-)
G99735 NA non-coding downstream 76727 16497485 ~ 16498531 (-)
G99724 NA non-coding downstream 146632 16424750 ~ 16428626 (-)
G99679 NA non-coding downstream 263288 16311708 ~ 16311970 (-)
G99777 NA non-coding upstream 19883 16599093 ~ 16600378 (-)
G99804 NA non-coding upstream 135237 16714447 ~ 16714835 (-)
G99816 NA non-coding upstream 291432 16870642 ~ 16871119 (-)
G99830 NA non-coding upstream 422784 17001994 ~ 17004413 (-)
G99860 NA non-coding upstream 555717 17134927 ~ 17135183 (-)
AMCG00015691 NA other downstream 39790 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 102081 16467299 ~ 16473177 (-)
G99646 NA other downstream 353103 16221765 ~ 16222155 (-)
G99605 NA other downstream 472802 16017583 ~ 16102456 (-)
AMCG00015666 NA other downstream 871968 15687642 ~ 15703290 (-)
AMCG00015694 NA other upstream 13018 16592228 ~ 16611444 (-)
G99939 NA other upstream 1258370 17837580 ~ 17837942 (-)
AMCG00015723 lsm6,LOC106610200 other upstream 2048395 18627605 ~ 18630665 (-)
AMCG00015752 NA other upstream 3395746 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 3648157 20227367 ~ 20279644 (-)

Expression


Co-expression Network