AMCG00015970


Basic Information

Item Value
gene id AMCG00015970
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32065497 ~ 32072955 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015970
ATTTGAATGGCTGCAGTCAGCTCAGCTCCTGTGCGCCCCCTGCTGTCCACAGCGCAGGGGGTTATTAGTGAGTGTGCAGGCACTGCAGCGGGCTGCGCACACAGCCGCTCTCAGACGCCTTCGCGGAGGAACTGGGCAGGGTGCAGCGTGTAGCGTGTCATGTGACTCGGGGCTGTCGCACAAGCATGACCGCGTCACATGACCGCGTCAGCTGATGAGTGCGGAAGTGCTGGCGTTTTGTGCGCCGCAGGTCATGCATGTAAACGCGCTGTGACAGGACAGGCGAGCGTGTGACCGAGGCCGCGGCTGTAACGCAGACATGGCGATGTGGACGACAGCAGCGAGCTGCGCGGTTTTTATATCTGCGCTGTGTCTGTGCAGCTGCCAGCGCCAGGAGGGAGAGCCCGTGCCGGTGAGCCTCTGGCAGCTGGGTAAGAGCAACACGACCAACAGCACCGAGCTGGTGTACGGATATGTGTCCTGCGCCGTCTCCGCTGTCTTCTTCGGCAGCAACTTCGTGCCAGTGAAAAAGTTTGACACCGGCGATGGGATGTTCTTCCAGTGGGTCCTCTGCGCCGCTATATGGCTCGTCTCTCTCGGGGTCAACATCCTCCTCCAGTCCCCCACGTTCTGGCCTCTGGCGATGCTCGGGGGAGCCATCTGGGCCACAGGTAATATTACAGTGGTGCCAATCCTGAAAACCATCGGCCTGGGACTGGGAATTCTGATCTGGGGCTCCTTTAACCTGCTGATGGGGTGGGCGAGCTCGCGGTTCGGCTGGTTTGGGATCGACCCGGAGGAGGTAGCCAATCCCGTGCTGAATTACTGTGGAGCAGGGCTGTGTCTTTTAAGtGCCATCATATTCTTCTTCGTTAAAAGCGATGTTCAGAGATCCTCCTCTTCAGAAGAGACTCCTCTGCTGCTTGACAGCAGGATCAACAGCGAGGGGACGGGCTCGTCCGACGACTCCTGGGTGGACCGGCTGTCTCCGCAGAGGAAGAGGATGATaGGCTGCGGTCTGGCCGTGGTGGCGGGGCTGCTGTACGGCTCCTCGTTCGTGCCGGTGCTGTACATCAAGAGTCGCGCCGGGAGGCCTGGCAGCAGATACACCAAAGCCAGCCGGTTCGACCTGGACTATGTTTTCGCACAGTTCAGCGGCATCTTCCTCACCAGCACCGTCTACTTCCTGGTGTACTGCGCCGCCATGAGGAACAAGCCCAAGGTTTACCCCCGAGCCATCCTGCCAGGATTCGTCTCCGGCGTCATGTGGGCCATCGCCAACTGCTGCTGGTTCCTGGCCAACAACTACCTCAGTGCCGCCATCAGCTTCCCGATCATAACCGCAGTCCCGGGTCTCATCGCAGCTGTATGGGGCGTGCTGGTGTTCAGAGAGGTGAAGGGACTGCGGAACTACTTGGTGCTGGTGCTGGCGTTCCTCATTGTGGTGGCCGGGTCCCTGTGTGCCGCTTTCTCCAAGGAGTAGTGAAGCGGGCGCCCGGTGTGGCCGCAAGGGGGCGCTCCCTGACCGCGCTGGGCCCCGGAGAGACGGGCGGCATGCCCTGCACACGTGTGAAGTGAGAGCGAGGAGCACGTCTGTGAAATCGCATGCCTCCCTCTCGTGACGCCGGCCTGCGGGTCGGGTCGTCCGAGTTCTGTTTTAATACGTTCTCTCTGAAGCACTTTGTCTGGATGCGGGAATCTGACGCCAGGCTGATGTTTAATCAAGTCAAGGGCACAGCTGCTGACACGTTTATAAACAAACTGACTATTTCTACTTTGTACCAGGTTATTTTCTTAATTCACGCTGGCGAtcggttttgtttttgagacCCCAGGGGCTCTGGGGAAGACTGATCAATAATCGGGGTCGGGGTTCCAGTGTTTTCTACTCGGGATAAATTTGGGGGCATTAAGCTGAGAAAAGAGTGTTAATGAAGGTCACATTTACTCATtttcatatgtatataaatctgGAAATGCTTCACAATGTCGGCAGGGTTGAGCCGTACACGTTGTGCCCTGCTGTGTGCCTCTACATGTGCTTTGTATTGAATGAAGGGACTTTTCTAAAATAAACCATGGGAATGggttgtaatttgtatttatttttagatgtgtTCGTGTTGGAAAGAGCGATACAGCTCACTGGCAGTGTCTTCTGCTCGGATGTGATTTGGGTTTGAGAGGCTGTGGAGGCTGCAGGACCCTGCTTTGTGCTCTGGGCCCAGAACCCCGTGGTTGACATCTTCACAGTGACTGATGTGCGGACCGGTACGCCCAGCTGTGCTCAGATCTGTCACGGCACACGCTCGACAAACGCAGCTGTTCAAATCCAGTGtcagaaatcaaacaaatcGCTCGTCCCTTCACTGCAGTCAGACGGACTCCCCTCCCCTCGACTACAGCCTGAAACCATTCaagggaataaacaaataatgataacTATACTGTGCCCAAAACGAGACGGAAGGGCATCAATCAAAAACGGGAACTTCCATagattacaattaaaaacatttatattcatatttgacATATTTTCATGTTCCTTTTTCTGTTTATAAAACCTGTCCCCATAATCGAATGTATTTAGAACCCCGTTTAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015970 True 2607 mRNA 0.55 12 32065497 32072955

Neighbor

gene id symbol gene type direction distance location
AMCG00015972 NA coding downstream 38522 31998123 ~ 32026975 (-)
AMCG00015971 etfdh,LOC102777291,LOC106604511,LOC107758565,LOC104941522,LOC102789087 coding downstream 72478 31988287 ~ 31993019 (-)
AMCG00015963 NA coding downstream 191604 31855622 ~ 31873893 (-)
AMCG00015961 NA coding downstream 299131 31747028 ~ 31766366 (-)
AMCG00015958 fstl5 coding downstream 474689 31585936 ~ 31590808 (-)
AMCG00015973 NA coding upstream 4272 32077227 ~ 32078059 (-)
AMCG00015974 NA coding upstream 5538 32078493 ~ 32081016 (-)
AMCG00015976 gria2,LOC106604527 coding upstream 91239 32164194 ~ 32208315 (-)
AMCG00015975 glrb coding upstream 156591 32229546 ~ 32250498 (-)
AMCG00015983 tdo2 coding upstream 322219 32395174 ~ 32400093 (-)
G102020 NA non-coding downstream 111849 31952908 ~ 31953648 (-)
G101996 NA non-coding downstream 240801 31824435 ~ 31824696 (-)
G101911 NA non-coding downstream 1094610 30892328 ~ 30970887 (-)
G101859 NA non-coding downstream 1305073 30754887 ~ 30760424 (-)
G101855 NA non-coding downstream 1318689 30746569 ~ 30746808 (-)
G102092 NA non-coding upstream 289508 32362463 ~ 32362863 (-)
G102149 NA non-coding upstream 457316 32530271 ~ 32530594 (-)
G102234 NA non-coding upstream 591817 32664772 ~ 32681331 (-)
G102237 NA non-coding upstream 625072 32698027 ~ 32698376 (-)
G102261 NA non-coding upstream 723150 32796105 ~ 32796333 (-)
AMCG00015965 NA other downstream 95210 31954646 ~ 31970287 (-)
G102017 rapgef2,LOC102783712 other downstream 120322 31908489 ~ 31945175 (-)
AMCG00015960 NA other downstream 348167 31707378 ~ 31717330 (-)
AMCG00015962 NA other downstream 365991 31673484 ~ 31699506 (-)
G101963 NA other downstream 435931 31629248 ~ 31629566 (-)
AMCG00015979 NA other upstream 313958 32386913 ~ 32390012 (-)
AMCG00015984 gucy1b3,gucy1a3,LOC107572203 other upstream 350173 32423128 ~ 32446965 (-)
AMCG00015985 gucy1a3 other upstream 376545 32449500 ~ 32456878 (-)
AMCG00016006 NA other upstream 836221 32909176 ~ 32938058 (-)

Expression


Co-expression Network