Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015974 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 32078493 ~ 32081016 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| id | description |
|---|---|
| ko05414 | Dilated cardiomyopathy |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015974 | True | 465 | mRNA | 0.65 | 3 | 32078493 | 32081016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015973 | NA | coding | downstream | 434 | 32077227 ~ 32078059 (-) |
| AMCG00015970 | NA | coding | downstream | 5538 | 32065497 ~ 32072955 (-) |
| AMCG00015972 | NA | coding | downstream | 51518 | 31998123 ~ 32026975 (-) |
| AMCG00015971 | etfdh,LOC102777291,LOC106604511,LOC107758565,LOC104941522,LOC102789087 | coding | downstream | 85474 | 31988287 ~ 31993019 (-) |
| AMCG00015963 | NA | coding | downstream | 204600 | 31855622 ~ 31873893 (-) |
| AMCG00015976 | gria2,LOC106604527 | coding | upstream | 83178 | 32164194 ~ 32208315 (-) |
| AMCG00015975 | glrb | coding | upstream | 148530 | 32229546 ~ 32250498 (-) |
| AMCG00015983 | tdo2 | coding | upstream | 314158 | 32395174 ~ 32400093 (-) |
| AMCG00015987 | LOC105030636 | coding | upstream | 418195 | 32499211 ~ 32507480 (-) |
| AMCG00015989 | NA | coding | upstream | 505684 | 32586700 ~ 32598705 (-) |
| G102020 | NA | non-coding | downstream | 124845 | 31952908 ~ 31953648 (-) |
| G101996 | NA | non-coding | downstream | 253797 | 31824435 ~ 31824696 (-) |
| G101911 | NA | non-coding | downstream | 1107606 | 30892328 ~ 30970887 (-) |
| G101859 | NA | non-coding | downstream | 1318069 | 30754887 ~ 30760424 (-) |
| G101855 | NA | non-coding | downstream | 1331685 | 30746569 ~ 30746808 (-) |
| G102092 | NA | non-coding | upstream | 281447 | 32362463 ~ 32362863 (-) |
| G102149 | NA | non-coding | upstream | 449255 | 32530271 ~ 32530594 (-) |
| G102234 | NA | non-coding | upstream | 583756 | 32664772 ~ 32681331 (-) |
| G102237 | NA | non-coding | upstream | 617011 | 32698027 ~ 32698376 (-) |
| G102261 | NA | non-coding | upstream | 715089 | 32796105 ~ 32796333 (-) |
| AMCG00015965 | NA | other | downstream | 108206 | 31954646 ~ 31970287 (-) |
| G102017 | rapgef2,LOC102783712 | other | downstream | 133318 | 31908489 ~ 31945175 (-) |
| AMCG00015960 | NA | other | downstream | 361163 | 31707378 ~ 31717330 (-) |
| AMCG00015962 | NA | other | downstream | 378987 | 31673484 ~ 31699506 (-) |
| G101963 | NA | other | downstream | 448927 | 31629248 ~ 31629566 (-) |
| AMCG00015979 | NA | other | upstream | 305897 | 32386913 ~ 32390012 (-) |
| AMCG00015984 | gucy1b3,gucy1a3,LOC107572203 | other | upstream | 342112 | 32423128 ~ 32446965 (-) |
| AMCG00015985 | gucy1a3 | other | upstream | 368484 | 32449500 ~ 32456878 (-) |
| AMCG00016006 | NA | other | upstream | 828160 | 32909176 ~ 32938058 (-) |
