AMCG00015972


Basic Information

Item Value
gene id AMCG00015972
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 31998123 ~ 32026975 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015972
ATGCGCTCAGGTGGAGTTGTGTTCCTCACATGCCGCACCTCTGCGCGTCGGGAAGGGACGCTGCTTCAGTCGCATCGACACCCCGACGCGGACACACACTGCGCCCCCTGCTCCCGGACCCTGCGCGCTGAGgtgcctgtgcctgtgcccGTGCCTGTGCCCGTGCCTGTGCCCGTGCCTGTGCCTGTGCCGCCGCTGGGCTGCTCCCTGCCCCTGGCACCGCGCTTGCTTCATTCATTCAGTTTTCTCTGTCAGTGCGCTTCTCTCCGCGACTCCGCCGCGCCGGTGCAGAGGATGAGGTCGCAGGTGATAGGCACGCTTCTCCTATGCGCCCTGAGAGGTGCTCTGGCCTCGTTCGACCTGGCTGGAGCTCAGTCCAGCTGCCCTCTGGGATACTTCCCCTGTGGAAACCTGACCAAGTGTCTGCCGCAGCTTCTGCACTGCAACGGCGTGGACGACTGTGGCAACCAAGCCGACGAGGAGAACTGCGggGATAACAATGGATGGCCCCACCTCTTCGACAAATACTTCGGGGTTCTCAGCAACGATTTCGGAACCACGGCGAAGGAGTGCCTGCTGGGTCCGGTTCCAGAGCCGTGCTCCTGCCTGGGCCTGAAGCTGGACTGCGACGATGCCCAGCTGCGGAGCGTCCCCTCCGTCTCCACCAACGTGACCCTGATGTACTTGCAGCACAACAAGATCCGGGTGGTGAACACCTACGCTTTCCGGGGATTGTTCAACTTGACACGGCTATATCTAAGCTACAATAAGATCTCCTATCTGAAGCCCGGCGTGTTTCAGGACCTGCACAAGCTGGAGTGGTTAATCCTGGAAAACAACAGGATCAACAGGGTCTCCTCGGTGGTCTTCTCAGGGCTGAGCTCGCTGATGCTGCTGGTCCTGATGAACAACTCCATCAGCCATCTTCACAGCCGGCCCATTTGTCTGGGAATGCCTCGCTTAAACTGGCTCGATCTGGAAGGGAACCACATCCAGAGTGTGGGCAACGCCACTTTCTCCGCCTGCCACATGCTGACCGTGCTGGTCCTGCAGCGCAACAGGATCACACACTTGGGGGAGGGCGTCTTCTCCCCCCTGCAGAGACTCGGAGAGCTAGATTTGTCAAGCAACAGGATTCAGACAATCCCTCCTCATCTGCTGGATGACCTGAGTGAGTTATTACAGCTGAACATTTCTTACAACCCGATCCTGGAGCTGCAGACAGACCTCTTCGATAAACTGCATAAACTCAAATCCCTaagtatAGAAGGCATCGAGATCGGAAACATACAGAGGAGGATGTTTGAGCCGTTGAAAACGCTGACTCACATatacTTCAGGAAGTTCCAGTACTGTGGCTACGCGCCGCACGTGCGCAGCTGCAAGCCCAACACCGACGGTATCTCCTCCTTCGAGAACCTGCTGGCCAACATCGTGCTGCGCGTCTTCGTCTGGGTCGTGTCGGGCGTCACCTGCTTCGGGAACATCTTCTTTCGGGGCGAGTACAACCGGCACGCCCAGGCCTGGATGGACAGCGCGCAGTGTCAGGTGGTGGGCTCCCTGGCCATGCTGTCCACAGAGGTGTCCGTGCTGCTGCTGAGCTACCTGACCCTGGAGAAGTACATCTGCATCGTCTACCCATTCCGCTACCTCACGCCGGGCAAGTGCCGCACGGTGTCGGTGCTCGTGGTCATCTGGGTCCTGGGCTTCATGATCGCCTTCGTGCCGCTGGTGGGCCATGACCTGTTCAAGAACTTCTACGGCACCAACGGCGTGTGCTTCCCGCTGCACGCCGAGCAACCAGAGACCACCGGCGCCCGGGTCTACTCCGTGCTCGTCTTCCTCGGGCTGAACCTGGTGGCGTTCATCGTCATCGTGTTCTCCTACAGCAGCATGTTCTACAGCATCCAGAGGACCGGGACCAAGGCCACGGAGTACAGCAGCCACGTGAGCCGGGAGCTGGCCATCGCCAAGCGCTTCTTCTGCATCGTAGTCACGGACTCGCTCTGCTGGATCCCCATCTTCATCCTCAAGGTGCTATCTCTGCTGGAGGTGGAGATCCCAGGTACAATAAGCTCCTGGGTGGTGATTTTCATCCTTCCCATCAACAGCGCCCTGAACCCCATCCTCTACACCCTGACCACACGGCCATTCAAGGAGACGATTATGCAGGTGTGGAAAAACTACCGCCAGCGCCGCCCCCTGTCCACCAGCCAGTCTGCCTACACCCCCTCCCTGAGCTGGCTGGAGATGTGGCCGGTGCAGGAGACCAGCCCCGCCGTGTCCACGCCCGAGTTCCAGCCCGGCGCCCCGGAGATGCCCTACGGCCTGGGCCGGCCCGAGCTGCTGCCCATGAAGACCAATCACAGGACCTGA

Function

GO: NA

KEGG:

id description
K04306 RXFP1, LGR7; relaxin family peptide receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015972 True 2376 mRNA 0.60 18 31998123 32026975

Neighbor

gene id symbol gene type direction distance location
AMCG00015971 etfdh,LOC102777291,LOC106604511,LOC107758565,LOC104941522,LOC102789087 coding downstream 5104 31988287 ~ 31993019 (-)
AMCG00015963 NA coding downstream 124230 31855622 ~ 31873893 (-)
AMCG00015961 NA coding downstream 231757 31747028 ~ 31766366 (-)
AMCG00015958 fstl5 coding downstream 407315 31585936 ~ 31590808 (-)
AMCG00015957 NA coding downstream 478406 31488157 ~ 31519717 (-)
AMCG00015970 NA coding upstream 38522 32065497 ~ 32072955 (-)
AMCG00015973 NA coding upstream 50252 32077227 ~ 32078059 (-)
AMCG00015974 NA coding upstream 51518 32078493 ~ 32081016 (-)
AMCG00015976 gria2,LOC106604527 coding upstream 137219 32164194 ~ 32208315 (-)
AMCG00015975 glrb coding upstream 202571 32229546 ~ 32250498 (-)
G102020 NA non-coding downstream 44475 31952908 ~ 31953648 (-)
G101996 NA non-coding downstream 173427 31824435 ~ 31824696 (-)
G101911 NA non-coding downstream 1027236 30892328 ~ 30970887 (-)
G101859 NA non-coding downstream 1237699 30754887 ~ 30760424 (-)
G101855 NA non-coding downstream 1251315 30746569 ~ 30746808 (-)
G102092 NA non-coding upstream 335488 32362463 ~ 32362863 (-)
G102149 NA non-coding upstream 503296 32530271 ~ 32530594 (-)
G102234 NA non-coding upstream 637797 32664772 ~ 32681331 (-)
G102237 NA non-coding upstream 671052 32698027 ~ 32698376 (-)
G102261 NA non-coding upstream 769130 32796105 ~ 32796333 (-)
AMCG00015965 NA other downstream 27836 31954646 ~ 31970287 (-)
G102017 rapgef2,LOC102783712 other downstream 52948 31908489 ~ 31945175 (-)
AMCG00015960 NA other downstream 280793 31707378 ~ 31717330 (-)
AMCG00015962 NA other downstream 298617 31673484 ~ 31699506 (-)
G101963 NA other downstream 368557 31629248 ~ 31629566 (-)
AMCG00015979 NA other upstream 359938 32386913 ~ 32390012 (-)
AMCG00015984 gucy1b3,gucy1a3,LOC107572203 other upstream 396153 32423128 ~ 32446965 (-)
AMCG00015985 gucy1a3 other upstream 422525 32449500 ~ 32456878 (-)
AMCG00016006 NA other upstream 882201 32909176 ~ 32938058 (-)

Expression


Co-expression Network