AMCG00015973


Basic Information

Item Value
gene id AMCG00015973
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32077227 ~ 32078059 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015973
ATGCGAGGGTGGCCGGCTGTGAGGTCCATGTCAGACAAAGACAGGATTGTGTACGATCGCCTGGACAGGAACTGCTGTGGGTTCAAGCCCCGCAGAGAGGACCTGTGTGTGGAGAAGGGGCTGCACCGGGAGTGTGCCGATCAGGACAGCGTGGACCTGGTGCACATCGTCCACCGTCATGGCGACCCCGGGCGCCTGGTGTTCATCGATAACAAGGGCTATTTTGACCGGGACGAGAGCAACCTGGACTTCAAGCTGCTGGAGGGGATTAAGGAGTGA

Function

GO:

id name namespace
GO:0008410 CoA-transferase activity molecular_function
GO:0008260 3-oxoacid CoA-transferase activity molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015973 True 279 mRNA 0.59 2 32077227 32078059

Neighbor

gene id symbol gene type direction distance location
AMCG00015970 NA coding downstream 4272 32065497 ~ 32072955 (-)
AMCG00015972 NA coding downstream 50252 31998123 ~ 32026975 (-)
AMCG00015971 etfdh,LOC102777291,LOC106604511,LOC107758565,LOC104941522,LOC102789087 coding downstream 84208 31988287 ~ 31993019 (-)
AMCG00015963 NA coding downstream 203334 31855622 ~ 31873893 (-)
AMCG00015961 NA coding downstream 310861 31747028 ~ 31766366 (-)
AMCG00015974 NA coding upstream 434 32078493 ~ 32081016 (-)
AMCG00015976 gria2,LOC106604527 coding upstream 86135 32164194 ~ 32208315 (-)
AMCG00015975 glrb coding upstream 151487 32229546 ~ 32250498 (-)
AMCG00015983 tdo2 coding upstream 317115 32395174 ~ 32400093 (-)
AMCG00015987 LOC105030636 coding upstream 421152 32499211 ~ 32507480 (-)
G102020 NA non-coding downstream 123579 31952908 ~ 31953648 (-)
G101996 NA non-coding downstream 252531 31824435 ~ 31824696 (-)
G101911 NA non-coding downstream 1106340 30892328 ~ 30970887 (-)
G101859 NA non-coding downstream 1316803 30754887 ~ 30760424 (-)
G101855 NA non-coding downstream 1330419 30746569 ~ 30746808 (-)
G102092 NA non-coding upstream 284404 32362463 ~ 32362863 (-)
G102149 NA non-coding upstream 452212 32530271 ~ 32530594 (-)
G102234 NA non-coding upstream 586713 32664772 ~ 32681331 (-)
G102237 NA non-coding upstream 619968 32698027 ~ 32698376 (-)
G102261 NA non-coding upstream 718046 32796105 ~ 32796333 (-)
AMCG00015965 NA other downstream 106940 31954646 ~ 31970287 (-)
G102017 rapgef2,LOC102783712 other downstream 132052 31908489 ~ 31945175 (-)
AMCG00015960 NA other downstream 359897 31707378 ~ 31717330 (-)
AMCG00015962 NA other downstream 377721 31673484 ~ 31699506 (-)
G101963 NA other downstream 447661 31629248 ~ 31629566 (-)
AMCG00015979 NA other upstream 308854 32386913 ~ 32390012 (-)
AMCG00015984 gucy1b3,gucy1a3,LOC107572203 other upstream 345069 32423128 ~ 32446965 (-)
AMCG00015985 gucy1a3 other upstream 371441 32449500 ~ 32456878 (-)
AMCG00016006 NA other upstream 831117 32909176 ~ 32938058 (-)

Expression


Co-expression Network