G95778


Basic Information

Item Value
gene id G95778
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2943087 ~ 2945852 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119434
tttttttcctccctctctcttctccctgtTCGGCGCAATCGCTTAACAATGTGCCCCCTAAAGCCCGGCGCGTTTTGATGATGTCAGTGCCCAGCGAGCCAATAGGTCGGGCGGTCGCGCAGGAAGAGCCCGCCTGCAAAACTTGTGCGTGTTACAGATTTCacttctgtctctctttttttctgtctccGTGTCTCCTCGCGTTAAGTCGTTTATTTGTCCTTGCTTGTGAATGCTTGTTCCGcccatggggggggggggagctgggATTGACGAAAATGGCAATAAATAGGCGCCCTCCTCCACTTCGcgccgccccccccaccaccacataATAAACCATCGACTTGTCAGGTTACCTCGTGTTCTAAAATGCAGTGTGGCAGCCATTACAGGACAGCTAGACAGGAAACTGCAGCAACAAAAGATGGAGGACAGTCAGCGAGATCAGgtCTTCCTTTAAAACAGAGATGCCCTCCCATCCTGGTCCTTGAGAGACTGCAGTCCAGCCTCTCCATGTTCCTTCACTCCACCCAATACTCTACAACTACCTTATTTGTTAAACTACCTTAATTGGGTGTGCTAATTGATTGCCTAATTAGTCTCCATTACCCCCATGCGTCCATTCAGGGTTTATCTGTGATGGATGATATAGTGTCCACAGTTTGTTAGTTTGTCTCAGTATGACTGTCCTAACAGGCCCAGTGTGACTCTGTGAGACTCAGGGATTCATAGAGGAGCTGGGAGACACACTTGGACTGGGGTACCCCCCAGATCTTGGATTGGGGACCCCTGTATTCGGGCAGAGAGACCTCAACAAACGATGGGGGGCTTCTCCAGATGTGGCCCCAGAGATGTTACTTGGGTTTCGGGGGAATCAGCCTGTAAACCGCCCCCTGAGTGTGGTGTGCTAGTGGAGTGtggtatttgtatgtgtgtgcagtgtggaggtgtgtgtgtttgtggaatGTGCTTTGGAGCACTGTATTTGTGTAGTGTACAATGAAGCGTTATGTTTGTGGAGTGTGCTGTGGTGCATTGTGTTTGTGGAGTGTGCtgtgttgcattgtgtgtgtaaaGCTTGCTATGCAGCACTGTTTGTggagtgtgctgtgctgtgttgtgtttgtggagTGTGCTGTGGTGCATTGTGTTGGCACCCCACTTCTGCAACCTATAGGTAGCATATCCCCAAGGTGATGCCACACCTTGAACAGAAGTGTTGATTTTCTAGTGTAATtttgatggtgtgtgtgttcagttgtGGGAAGGAAGGGTCTCTGTGTCCTGGACAGCTGTGGAATTAGTACTGTAGAGTTTCCGGTTCAGTATCCTGAAAGAAGCTTCCCAGATATCTTTGCCTAGATATCCCCTGGACTCCTGTTTAACAGCAGGCATCCTAGGCATCTGGATCCAGCTTTCCCCTTTAAAAGTACCCCACTGTACTACTGTGGTGCTGCATGGCATATCATAATACCTACGGTGGTCTACCCAATACCTTTATGTTGTACAATGGTGtaccaaaaaaacatacatggtGCATCCGGTAACTAGAATGTTCGGTGGAACACCTGTAGCACAGACATGTGACATAAGGAGATCTCCAATATCCTGGTACATAATCAGGATAATTAAATACCATGGTATTCCAAATTAAcaaccttttttcttcttgtccCAGAGTGAACAATTAGtttctattaaaaatgtaccatggatgtttgtttgtttattggtttctttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119434 True 1746 lncRNA 0.47 2 2943087 2945852

Neighbor

gene id symbol gene type direction distance location
AMCG00015136 NA coding downstream 14810 2925485 ~ 2928277 (-)
AMCG00015139 NA coding downstream 20575 2915988 ~ 2922512 (-)
AMCG00015138 NA coding downstream 32673 2905065 ~ 2910414 (-)
AMCG00015137 NA coding downstream 39455 2893323 ~ 2903632 (-)
AMCG00015129 NA coding downstream 98574 2836730 ~ 2844513 (-)
AMCG00015144 NA coding upstream 54964 3000816 ~ 3008611 (-)
AMCG00015154 NA coding upstream 289653 3235505 ~ 3239525 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding upstream 296258 3242110 ~ 3247588 (-)
AMCG00015152 NA coding upstream 305129 3250981 ~ 3268761 (-)
AMCG00015158 NA coding upstream 357905 3303757 ~ 3313326 (-)
G95780 NA non-coding downstream 3992 2936294 ~ 2939095 (-)
G95675 NA non-coding downstream 200485 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 245264 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 265958 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 266408 2676439 ~ 2676679 (-)
G95786 NA non-coding upstream 14483 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 47822 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 179579 3125431 ~ 3127592 (-)
G95933 NA non-coding upstream 526355 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 656752 3602604 ~ 3603677 (-)
AMCG00015135 NA other downstream 51391 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 64095 2874107 ~ 2878992 (-)
G95700 NA other downstream 127020 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 272843 2660927 ~ 2670244 (-)
G95536 NA other downstream 592037 2350660 ~ 2351050 (-)
G95791 NA other upstream 32345 2978197 ~ 2980408 (-)
G95850 lipe other upstream 240317 3186169 ~ 3189093 (-)
G95854 NA other upstream 250569 3196421 ~ 3197189 (-)
G95921 NA other upstream 404027 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 657831 3603683 ~ 3607192 (-)

Expression


Co-expression Network