G95850 (lipe)


Basic Information

Item Value
gene id G95850
gene name lipe
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3186169 ~ 3189093 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119524
GTTTTACAACTCGATGCTCCATAACATGCTTTATTGATTATTGAcgtttttttaaaaaaaaaatcatgcacgcacgcacacacacacacacacacacacgccaacGCAGACAAACGCACATAGGCGCTGCACTACACGCtaaaggcagacagacagagagacgcacacagacccTCACCTCTTTCGTGTTCACGGTACCTTTGACGTACTTCGACCGAACCGGGTCGGCGCAAAGAATATACGACAGCACCACCAGCCAGAACCGCTCCTGGGCCCGCTTCAGCCCGGCCAGGTCCATTCTCCGCTCCCCCTCTCGTTACTTATCCCTGTCGTTTCTGGCAATAATTGTCTTCCCTTCTTCTCTCCCAAGAGTTCAGAATGCAAAGTGTCGGGAGCGAGGATGCTTCACCGAGAGAGGAAATGCGCGCGCCCGCCTCTCCCCACTCTGTATTCTGTTACACATGCGCGCCCCCGCGACGATCCGCATGCCCGCCGCCCCTTCTACCCGTGCTCGGCGCGTCCCCGTGTTCCGGATTGCGACACACGGACACAGCGACCTCAATTCCCCgtattaattatatacacagacacacacacacatacacacaatctctcacacacactttctttaTGTGGAATAGCAGGTTGAACAACACACAGATGTATTaatatcattttcatatttattcctttaaaaatcaaaaaccaGGCGGTTTCACTTCAGAGAgttatctatatataaattcatacatatatatatatatatatatatataaatttcatagatAAACACCAAGACCATTGTAGTTTtatgcaaaacaacaaccaatgaaaatagcaataataacaatatttataattatgaatGATAGTAAAAATATTCTCTACAGAATGAGTTAAGGAGTGGTTGGTTGCACTttaggcttaaaaaaaaatcaattttttaaatgtgcttgtttTACATGTCctgggaggaggagaagaaactgaaaaacgGGGACCAAagaagaaggaaggaaaaaaatagaataaatactaAAAAATCAAATAGAGAGAATAAGGGTCCAGTGCTAATTTAGTAATTAAAAACTTGGCCAATTATGCAATTAATGGTCAAATACACAATTAAGTGGCTGCAGTAGAGGCTCATGGGATAATGTGCTTTGAGGTCAGCactcaacacagcacagcacaaaatGACAACACAGCACACGCTCACACATGTGCCAGGGATGGAGAcggtggggggggagagagcaAAAAGTAAGATACACAGATAGTGAGACAGGGACAGACTGGCAGAGTgacaggaagacagagagaggagagaagagagtaTGATAAAAAGACAGATAAACAGatagacaaacacagacagacagtgccCTCCCAGAGTCACAGTGCGTCTGTAAGCTCCAATCAATAAGGTTAATTTTGTTGTAAACATCATAGTGTGgagaacacacagacacacagcttcATTACAGTCATTACAGTTacagtacaaacaattaaataaaatctgatgTTATTACACATAATCTGCAGTTAGTGATGTTACTCTGTACACCATAAAATCAtgtaataacataataattacaCAGTCTGCTGTAGAGTGTTAATAGATGTGTAATTACACTGACTAATGATGCAGCACCTGGTAATATCAGTAATGTGAGAATAGAAACACTACCCCATGTAGCTATGGTTAATAATTGCACTGATtagtaaagtaaattaaacagtctaataacaataatgcagCTCCAGATAATACAAGTTAATTAATAACAGTAACTTAAGTTAATAGTCTAATTATCGTGATGTAACTACATGTTTATAAGAATGTAATTATActgttatatattgttttatatatatatggttataCACAATATAATGGTTTAAGTATAAATCATATAGTTAAACTAATTAAACTATAGTTCATAGCTGTTTAATAGCAATTGGCTGCAGTGATTAGTACAGTGTAAGAGAAAGGCAATGAGGCTCaattagtgtgagtgtgtatatatgtcagcatgtttgtgagtgtgtgtattagtCTTAGTGagtgttgtgtatttgtgtcaGTGCTGGTGAGAGCTCTCTGGTCACTTTAAAGCAGTAGCTTATTACAGTATTGCAGCTCCCACCTCCTCAACAAACCCCTCCATTAACAGGTAGAAGGCAAAATTGTGCGATATAATCAAGTCCCCCCTACACTCTCAACAACACTTCCTATCACTCTTTTGCTCTATCTCTCTGGCTCCCTCTCTTCTGTCCTCACTTCCTCCCAGCCTCTCTTCTCTGCCCCTCTTTCTCGTTCCCCTCTGCCATTTCAGTCTCTCCCCTCTCCATTACgcattctctcactctctctataCCCTCTTACCCACTCTCTATgggccccctctctctccacctaCAACCTCTCTCATGGTCTTGTTTTCCCCCTCTCTATTggctcctctttctctctcccactctctctctctctcaggctccTATCTCTCTGCTGGCTGCATTGCTGTGAGACTCCACTCCTTCCTCTGGCTCCGCCCCACTATTGGTCCTATCTCCCCTGATGTCCCCGCCCTGGGCCCCTCCCCCAGAATCTGGGAGATTGGCCTGCGTCCTCTCCAGCTTCCTGTGCTTGCGGATAGGGGGCAGGACCTTCTGGTTGAAGATGTCCCTGATTCGATCCACGCAGATATTGGCCGCCTCCCGGGTCTCCCTGGAGAGCTGCGATAGGCTGAGGAAGCCGTGAGGGAGGTCCTCCACCACGCAGAGGCTCACCGGTTGGTCGACGGCACGCAGCCTCTTGGCGAACATCACTGAGTCATCGAGCATGGGGTCCAGAGCAcaggc

Function

symbol description
lipe Enables carboxylic ester hydrolase activity. Predicted to be involved in diacylglycerol catabolic process and ether lipid metabolic process. Predicted to act upstream of or within cellular response to cold; long-chain fatty acid catabolic process; and triglyceride catabolic process. Located in cytosol. Implicated in familial partial lipodystrophy type 6 and hypertension. Biomarker of arteriosclerosis and type 2 diabetes mellitus.

NR:

description
PREDICTED: hormone-sensitive lipase isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119524 True 2868 TUCP 0.44 2 3186169 3189093

Neighbor

gene id symbol gene type direction distance location
AMCG00015144 NA coding downstream 177558 3000816 ~ 3008611 (-)
AMCG00015136 NA coding downstream 257892 2925485 ~ 2928277 (-)
AMCG00015139 NA coding downstream 263657 2915988 ~ 2922512 (-)
AMCG00015138 NA coding downstream 275755 2905065 ~ 2910414 (-)
AMCG00015137 NA coding downstream 282537 2893323 ~ 2903632 (-)
AMCG00015154 NA coding upstream 46412 3235505 ~ 3239525 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding upstream 53017 3242110 ~ 3247588 (-)
AMCG00015152 NA coding upstream 61888 3250981 ~ 3268761 (-)
AMCG00015158 NA coding upstream 114664 3303757 ~ 3313326 (-)
AMCG00015157 LOC103472502,LOC104927561,LOC103358743,LOC103394163,LOC108240267,LOC102201254 coding upstream 155281 3344374 ~ 3347587 (-)
G95814 NA non-coding downstream 58577 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 192014 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 222824 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 240317 2943087 ~ 2945852 (-)
G95780 NA non-coding downstream 247074 2936294 ~ 2939095 (-)
G95933 NA non-coding upstream 283114 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 413511 3602604 ~ 3603677 (-)
G95957 LOC100846954 non-coding upstream 428680 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 540906 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 681983 3871076 ~ 3871334 (-)
G95791 NA other downstream 205761 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 294473 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 307177 2874107 ~ 2878992 (-)
G95700 NA other downstream 370102 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 515925 2660927 ~ 2670244 (-)
G95854 NA other upstream 7328 3196421 ~ 3197189 (-)
G95921 NA other upstream 160786 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 414590 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 921226 4110319 ~ 4123963 (-)
G96094 NA other upstream 985786 4174879 ~ 4180441 (-)

Expression


Co-expression Network