G99565


Basic Information

Item Value
gene id G99565
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 15879418 ~ 15883521 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124360
aGTAAAGCAATGTTTGATGCTGGTagcctttaaaaaacaatacatatatgcaacaattaaaacaatgatgctggtagtattttaaaaaacaacaatacatacattcaagTAAAGCAATGTTTGATGCTGgtagtattttaaaaaacaacaatccatGCAtgctattaaaacaattttgatGCTGGTAGcctttaaagaaacaataaatacatgcaacaACTAAAACAATGCTTGATGCTGTTAgtattgtataaaacaataataaatacattcaattcaaACCATTCTGATGCTGgtaacaaaacatttagaagaccacaacagtaataaacatttaatgaattATACTTTTTCTGTGCATAATACTTAAGTATATAGACAACAAATATGGTACTTAAACACGTCTGGTACACATCTAACACCTTGCCAATCTATGCCAAAAGaaagtttattaaatgtactACAATAAGTGAAGATTTCTGACCTTTCTAAATGCCCAGAATTAATTTCTCAATGAATAGGACGGTATTTTTCactatttgtgaatattttatattgtaaacaaaataggAGGCAAAAAGAAGACTGAATCCTTGGGTGAGGTCCTCTGGTTCCTCAACAAGCAAATGTTGTCCATCCATTATGAGACACATTTCTGCATCCAGCTGGAAGGGATTTCCACAGATTTTAATGACTGGTGTCGCAGCTATAGGACCCTTTGTCAcggttccctagccctgaccctctttcccctcTAGAGGCCACCACTATTTCCCTGCCTTTTCATTATCTCTTCACTGCTCTCATTtctcactctttcaattaacattcctacacGCCCATGTGCACACTTGTTCCTTACCTCTTCTCTCATTGGCCCTGCACTTGCCTTCCCACCTTCTGCatcccttcttaaacccctcactgcttGCACGCAGGGTGAAGTGTCATCAAGCCTTGCTCCCTGTGTGCGCTCGCGGTTGCCCGCTCCCTGTCCTAGTCCTGTGTCTTACTCGACCTCCTTGATCTAGACCTTGCTTAGTCCTTGTGTCTTGTCAGCCTCCTCGACAaacactgcacctgggtcctaactCCCTTGCCCTGCGGTCCTCTCCTGAGACTGTGACACCCttcaataaaacagacaaaatgtcttgctctgtatttaaaaaacaaaatgaatctgtgtgaaaatgtagctttttcatattttaatattcacaaAAGCTTTTACCTATAGTTACATGTTTCAGTGTGGGCTCCAGTCACTCCAGCTGTTATCGCTTTTGGGTATGCAGTGTGTCTCAGGCAGATTAAATAATAGCTAGTTCTATATTCTGACTCAAACCTTCTTTGAAGAACTAtgacttgaaaataaaaatgcatgcatattCTAACTGAAAAGATAAAGAtggtgatgataatgataataataataataataattataataataataataataataaataaaaaaacgtttATCTTGTAGCTCACATAAAGGAGTTGTGTCTCCTCTTTCAACAGATGGGGAAGAAGCAATGCAGCAGACTTGGGATGCACAAATAAACGTATATAAAAGCCATTATTTTTTGGAAAGATTACATGATGGCTTACCAATCATATCAGCCAATCAGAGTTCTGGAACTTCCCTAAGTGTAAATTATTAACTGGCAAAAAGGCTACAAAAGGTGTGTACTTAGCTTGCTTTACTAGCATTATttgggcagtagtgtggagtagtggttaggactctggagcacagggttgtgggttcaatcacAGGTAGGGacgctgctgttgtacccttgagcaaggtgctttaactagattgctccagtaaatgtaaaaaaacgaATGTGATAtcttataacaattgtaagtcaccctggattgctccctttcccgtagcccctgactgtgaccctacatcttgacagcacttagcttttaccgtccaggatgtaggacctcacttactgtacttgcctgtgtaaattgtaaattgtaatttgtaaaatgtattatattttgaattgctatgttttatgtaaattgaatttgtaatgattgatgcctttattgaactgtatttttgcactttgttttgcacttatgttgtaagtcgccttggataagggcgtctgccaagaaataaaataaaataaaatataataataataataataataatattaagggtgtctgctaagaaatcaagtaataatcatataaataactataatattGTGCAGAAAAATATGTTACTTGTTTGGATGTACCTCTTCCCTTTGTCTTGCTGCATCATACAGATCAAGGAGATTCTTGCCCGTCTCTTTCCTTTTGCATTCTTCAATGATTTTGTCCGCAACAATCCCAAACCCAGACTTGAACTTTTTGTCAGTATCGACAATGTGGGATTTTGTAGCTACAGAGAAGAGCTGaatgttaaataatatattttttaataagattatTACTTTCCTACTTgccaattttaattttaaattacacagtaTATTATCATAGTCATTCCTATCAACcctattgtttaaatattactaCTTTAAAAGATAACTAggatatttgtaatgtttgatgcctgtacttaactgtattcttgcacttatgttgtaagtcgccctggataagggcatctgccaaaaaaaaaaaataataataataatatttgttttcccagagaaacaaatgtaatcaaaaggGATATTTTTTGAATCATTAATAATCAAATTcttaaagaattaaaatataagtatcacatttaaattatatcttAGAATAGGTGGAAAACAATATGCAGGATATTGCTCCAGTATTTCAATTGTAGAATGGctattaatacaaatgtcacGTTGATGGCctgttctgttcattttgtCTTGTAGAAAGCTAATGTTTGGTCAACTTTTTTTGCATTCGGCCAGCATCTGTTCTATATGCATCAAACAGTTCCTCTCATCTTCACCATTTATTTCTATCAGGATCTGTAAAGATAGTTACAACgtttattatttgtcattactgagatacaaatgttaaatatatatctgttaaCAGGTCATTGATGATCTGTCATGTATTCCATATGCAAaattttcaatttcataatTGAGCTGATTCAGCGTACACACTTCGTGATGAAGCAGTTGTTTAATTAGCAACTTTAGGACATGGGGCACAACTTCTAAAAAACATGCATGAGGTCGGGAGGAAAAACATGCAGAACTGGAGATGGTGCATACTTCAGTTTAGTGAAGCAGCATTCCTTTGCTACACCATATATTGGCACATTGTCTGGGTTTTCCTTTGCAGCCTGCAGATGATGCAACTAGTTTCATGATGTTCTTGCAATTAAATCCTCTTCTTCAAATTTTGATCCAATTTCTTCTCTTGTTGCCATACAAAACCGGCATATTCTTCcctcattaaatgtatttcttagccTGTGGACTGAAAGATTATCTCCTGAGATGCTTGCAATCGTCCCCAAGAAATGTCTTCCTTCTCCATTACATGACAAAGTCACACCTGATTATTCTAATTTTGCTGCATCTTCAAGTAATGACTTCGCGATGTCTGCATATGTGAAACCTTTCTGCAGTAACTTGTAACGGtagaaagatatatattttgaagatgAGAGCTGTTCTGTTTGTGTATATTGCCAGTTGAAAAATAGACAGCTGTTAGTTTGTGCTTCCCTCTTTTGGAGCCAagttgttatctttcaagtcggaatcaccttatatattccgactgcttctgtgttggttttttgtccacagggctttttcctccacagtagAAGCGCTGGCAGTGGCTGTAAAAtgcgaggcccggctgcccggcctgagccttggtgtgtcgtaagagatctcgcccgcgtgaggtgctcctccgccggcttgtgcccgcactacagcACTACGATGATACAggccaagtaaaaaaaatatatatacgttTTTTTATTAGACTTGCGTCAGTGCTCATGTGTTGGTTCGAGTATCCGCGTTGCCATTTTTGTATCCGATTGATGCGCTG

Function

NR:

description
PREDICTED: acyl-CoA desaturase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124360 True 4065 lncRNA 0.37 2 15879418 15883521

Neighbor

gene id symbol gene type direction distance location
AMCG00015667 NA coding downstream 65059 15792513 ~ 15814359 (-)
AMCG00015664 NA coding downstream 321642 15555165 ~ 15557776 (-)
AMCG00015662 NA coding downstream 540356 15338036 ~ 15339062 (-)
AMCG00015658 NA coding downstream 634524 15236134 ~ 15244894 (-)
AMCG00015655 NA coding downstream 771393 15094120 ~ 15108025 (-)
AMCG00015672 NA coding upstream 174281 16057802 ~ 16060001 (-)
AMCG00015676 NA coding upstream 368898 16252419 ~ 16272647 (-)
AMCG00015677 NA coding upstream 431967 16315488 ~ 16324527 (-)
AMCG00015680 NA coding upstream 562451 16445972 ~ 16448187 (-)
AMCG00015683 NA coding upstream 577201 16460722 ~ 16463940 (-)
G99535 NA non-coding downstream 125392 15753816 ~ 15754026 (-)
G99516 NA non-coding downstream 246810 15632395 ~ 15632608 (-)
G99513 NA non-coding downstream 314027 15565126 ~ 15565391 (-)
G99476 NA non-coding downstream 564965 15314153 ~ 15314453 (-)
G99424 NA non-coding downstream 697432 15053296 ~ 15181986 (-)
G99576 NA non-coding upstream 18930 15902451 ~ 15959831 (-)
G99594 NA non-coding upstream 103563 15987084 ~ 15990263 (-)
G99596 NA non-coding upstream 116281 15999802 ~ 16004030 (-)
G99614 NA non-coding upstream 176675 16060196 ~ 16068129 (-)
G99623 NA non-coding upstream 246543 16130064 ~ 16130295 (-)
AMCG00015666 NA other downstream 176128 15687642 ~ 15703290 (-)
G99454 NA other downstream 618934 15259461 ~ 15260484 (-)
AMCG00015660 NA other downstream 626697 15249901 ~ 15252721 (-)
AMCG00015659 NA other downstream 678627 15170615 ~ 15200791 (-)
G99426 NA other downstream 690024 15102617 ~ 15189394 (-)
G99605 NA other upstream 134062 16017583 ~ 16102456 (-)
G99646 NA other upstream 338244 16221765 ~ 16222155 (-)
AMCG00015681 NA other upstream 583778 16467299 ~ 16473177 (-)
AMCG00015691 NA other upstream 640593 16524114 ~ 16535468 (-)
AMCG00015694 NA other upstream 708707 16592228 ~ 16611444 (-)

Expression


Co-expression Network