G100933


Basic Information

Item Value
gene id G100933
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 24314177 ~ 24315419 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU126059
aaaacttttgcacagtactgtatatgtatacaaaaaatattaatgtaacgATACATTTCCTCATTACTATTGTTATTCTATGACTAGCATAATATACAGTAGGTATAGgaaatattcaccccccttggaattcacatttcacattctgTTGTGTTACAAGCAGAAATTATGATGCATtcaattagattttttaaatttacacaaTCTATTCCACATTTTCAATGTGTGAAAAATGGGGGATgaaaaaaattgattaaaattgcTAAGACAGTCAAGCAGGCGCAACCAATTGCCTTAAAAATACTGCTTGAAATCTTCAACATTTGGCAAAGAATTTAGTGgtctaataaaacaaaatataaatatttgacttaaatGCACATCACCCAGATAACatcatccctactgtgaagcatagTGGTGGCAGCATGATGTTATAGGGATGTTTTGTAGCGGCAGAACCTCACCTTCCAGTGGCataatgaccccaagcacacagccaaaacaacactgaagtggcttaaaaacaagaatgtgAATGTCCGAGAGTTGCCCAGTAAAAGTCCGGACTGGAATTCATTTGAGAATCTATGGCAAGACTTGAAGACTGCGGTCCACCAACAATCCCCATCCAATGTGACAGAGCTAGAACAATTTTGCTAAGAAGAATgggtgaatattgcacaatccagatgtgcataCCTAGTGGAAACTTACCACAAAAAacttacagctgtaattgctgccaaaggtagttctacaaagtattgactttggggtgttggggtgaatacttatctaaccaagacatttaattttttattgtattttattagctgttgtttcacaataaaaatgatcttGCCTCTTCAACCTACtcaagtgttgagtaggttgtgtaaatcaaagggaatAAATCCTattcaaacacatacaaatttCAGCTTGTAACACAACTAAATGTTAAAAAGTCCAATGGGAGTGAATCcgtcctatagccactgtagtTACCTGAATTGGACATTATGAAACAAACTGCCATACAGATTTTACTATGTGTGCATAATTTTTTCAGTAATCTTTGAAATTATTAAACTCATTGTCAATTGTAGCAAAAGTTTTGggatttaatgtttaatatgtgtatttatatggaatagttacatttttacacttcaaattattattatttgatatattaattgatatattcTGTTACtcagaacattattttaaatttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126059 True 1243 lncRNA 0.33 1 24314177 24315419

Neighbor

gene id symbol gene type direction distance location
AMCG00015831 fgf20b,LOC107752074,LOC107661435,LOC107565709,LOC103374382 coding downstream 99148 24211642 ~ 24215029 (-)
AMCG00015832 NA coding downstream 229312 24074358 ~ 24084865 (-)
AMCG00015828 NA coding downstream 454863 23757630 ~ 23859314 (-)
AMCG00015821 NA coding downstream 1028112 23283421 ~ 23286065 (-)
AMCG00015812 LOC107664486,LOC107586827,LOC107732002,LOC107719377 coding downstream 1271620 22990578 ~ 23042557 (-)
AMCG00015838 cnot7,LOC108432901,LOC107561084,LOC103042639,LOC102227457,LOC108237940,LOC103139883 coding upstream 6849 24322268 ~ 24332997 (-)
AMCG00015839 NA coding upstream 39144 24354563 ~ 24380469 (-)
AMCG00015840 NA coding upstream 139017 24454436 ~ 24460278 (-)
AMCG00015841 NA coding upstream 228178 24543597 ~ 24553955 (-)
AMCG00015843 NA coding upstream 278880 24594299 ~ 24600264 (-)
G100932 NA non-coding downstream 40 24313431 ~ 24314137 (-)
G100912 NA non-coding downstream 156083 24156585 ~ 24158094 (-)
G100908 NA non-coding downstream 249302 24062632 ~ 24064875 (-)
G100895 NA non-coding downstream 257033 24056780 ~ 24057144 (-)
G100871 NA non-coding downstream 380641 23922441 ~ 23933536 (-)
G101023 NA non-coding upstream 271066 24586485 ~ 24586999 (-)
G101036 NA non-coding upstream 303701 24619120 ~ 24619734 (-)
G101040 NA non-coding upstream 314145 24629564 ~ 24629783 (-)
G101045 NA non-coding upstream 428663 24744082 ~ 24744356 (-)
G101103 LOC107702333,LOC107746031 non-coding upstream 1084563 25399982 ~ 25402497 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other downstream 567474 23743790 ~ 23746703 (-)
AMCG00015800 NA other downstream 1611928 22680694 ~ 22702249 (-)
AMCG00015761 herc3 other downstream 4034533 20227367 ~ 20279644 (-)
AMCG00015752 NA other downstream 4332620 19974956 ~ 19981557 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 5683512 18627605 ~ 18630665 (-)
G101067 NA other upstream 677534 24992953 ~ 25000890 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 3671336 27986755 ~ 27997677 (-)
AMCG00015891 wdr17 other upstream 3726144 28041563 ~ 28069876 (-)
G101456 NA other upstream 3846418 28161837 ~ 28257732 (-)
G101540 NA other upstream 4788810 29104229 ~ 29106160 (-)

Expression


Co-expression Network