Gene
RNA
| Item | Value |
|---|---|
| gene id | G101045 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 24744082 ~ 24744356 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU126186 | True | 275 | lncRNA | 0.41 | 1 | 24744082 | 24744356 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015844 | frg1,LOC107656998,LOC107702291,LOC107554393,LOC107747397 | coding | downstream | 125912 | 24605666 ~ 24618170 (-) |
| AMCG00015843 | NA | coding | downstream | 143818 | 24594299 ~ 24600264 (-) |
| AMCG00015841 | NA | coding | downstream | 190127 | 24543597 ~ 24553955 (-) |
| AMCG00015840 | NA | coding | downstream | 283804 | 24454436 ~ 24460278 (-) |
| AMCG00015839 | NA | coding | downstream | 363613 | 24354563 ~ 24380469 (-) |
| AMCG00015862 | NA | coding | upstream | 661035 | 25405391 ~ 25774014 (-) |
| AMCG00015856 | NA | coding | upstream | 1050183 | 25794539 ~ 25812098 (-) |
| AMCG00015858 | NA | coding | upstream | 1072879 | 25817235 ~ 25826561 (-) |
| AMCG00015860 | NA | coding | upstream | 1102680 | 25847036 ~ 25980178 (-) |
| AMCG00015855 | NA | coding | upstream | 1297788 | 26042144 ~ 26045985 (-) |
| G101040 | NA | non-coding | downstream | 114299 | 24629564 ~ 24629783 (-) |
| G101036 | NA | non-coding | downstream | 124348 | 24619120 ~ 24619734 (-) |
| G101023 | NA | non-coding | downstream | 157083 | 24586485 ~ 24586999 (-) |
| G100933 | NA | non-coding | downstream | 428663 | 24314177 ~ 24315419 (-) |
| G100932 | NA | non-coding | downstream | 429945 | 24313431 ~ 24314137 (-) |
| G101103 | LOC107702333,LOC107746031 | non-coding | upstream | 655626 | 25399982 ~ 25402497 (-) |
| G101115 | NA | non-coding | upstream | 830047 | 25574403 ~ 25574921 (-) |
| G101181 | NA | non-coding | upstream | 1251487 | 25995843 ~ 26045342 (-) |
| G101242 | NA | non-coding | upstream | 1506767 | 26251123 ~ 26253246 (-) |
| G101249 | NA | non-coding | upstream | 1519720 | 26264076 ~ 26264315 (-) |
| AMCG00015825 | LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 | other | downstream | 997379 | 23743790 ~ 23746703 (-) |
| AMCG00015800 | NA | other | downstream | 2041833 | 22680694 ~ 22702249 (-) |
| AMCG00015761 | herc3 | other | downstream | 4464438 | 20227367 ~ 20279644 (-) |
| AMCG00015752 | NA | other | downstream | 4762525 | 19974956 ~ 19981557 (-) |
| AMCG00015723 | lsm6,LOC106610200 | other | downstream | 6113417 | 18627605 ~ 18630665 (-) |
| G101067 | NA | other | upstream | 248597 | 24992953 ~ 25000890 (-) |
| AMCG00015892 | spcs3,LOC106602378 | other | upstream | 3242399 | 27986755 ~ 27997677 (-) |
| AMCG00015891 | wdr17 | other | upstream | 3297207 | 28041563 ~ 28069876 (-) |
| G101456 | NA | other | upstream | 3417481 | 28161837 ~ 28257732 (-) |
| G101540 | NA | other | upstream | 4359873 | 29104229 ~ 29106160 (-) |
