Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016871 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 32922429 ~ 32924404 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0003341 | cilium movement | biological_process |
| GO:0003146 | heart jogging | biological_process |
| GO:0070286 | axonemal dynein complex assembly | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0005930 | axoneme | cellular_component |
| id | description |
|---|---|
| K23731 | CCDC103; coiled-coil domain-containing protein 103 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016871 | True | 1100 | mRNA | 0.49 | 4 | 32922429 | 32924404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016868 | NA | coding | downstream | 180 | 32921005 ~ 32922249 (-) |
| AMCG00016867 | NA | coding | downstream | 50904 | 32863246 ~ 32871525 (-) |
| AMCG00016864 | NA | coding | downstream | 230078 | 32674317 ~ 32692351 (-) |
| AMCG00016862 | NA | coding | downstream | 331895 | 32584019 ~ 32590534 (-) |
| AMCG00016857 | wnk4,LOC108257086,LOC108429078,LOC105912834 | coding | downstream | 375615 | 32545619 ~ 32546814 (-) |
| AMCG00016870 | NA | coding | upstream | 2627 | 32927031 ~ 32930813 (-) |
| AMCG00016869 | NA | coding | upstream | 7289 | 32931693 ~ 32934506 (-) |
| AMCG00016876 | dcakd,LOC107667188 | coding | upstream | 217034 | 33141438 ~ 33148429 (-) |
| AMCG00016878 | NA | coding | upstream | 230879 | 33155283 ~ 33160959 (-) |
| AMCG00016877 | pus3 | coding | upstream | 244226 | 33168630 ~ 33171933 (-) |
| G16293 | NA | non-coding | downstream | 60832 | 32859241 ~ 32861597 (-) |
| G16292 | NA | non-coding | downstream | 64964 | 32854781 ~ 32857465 (-) |
| G16250 | NA | non-coding | downstream | 485746 | 32434236 ~ 32436683 (-) |
| G16249 | NA | non-coding | downstream | 494349 | 32427852 ~ 32428080 (-) |
| G16248 | NA | non-coding | downstream | 496473 | 32425716 ~ 32425956 (-) |
| G16325 | NA | non-coding | upstream | 59850 | 32984254 ~ 32984464 (-) |
| G16375 | NA | non-coding | upstream | 331249 | 33255653 ~ 33256382 (-) |
| G16377 | NA | non-coding | upstream | 359610 | 33284014 ~ 33284227 (-) |
| G16378 | NA | non-coding | upstream | 367627 | 33292031 ~ 33292249 (-) |
| G16422 | NA | non-coding | upstream | 400682 | 33325086 ~ 33328341 (-) |
| AMCG00016859 | NA | other | downstream | 415110 | 32497507 ~ 32507319 (-) |
| G16247 | NA | other | downstream | 498991 | 32423058 ~ 32423438 (-) |
| AMCG00016847 | NA | other | downstream | 654461 | 32261549 ~ 32267968 (-) |
| AMCG00016815 | NA | other | downstream | 1534161 | 31380547 ~ 31388268 (-) |
| G15787 | NA | other | downstream | 2392929 | 30526292 ~ 30529500 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | upstream | 251672 | 33176076 ~ 33178883 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | upstream | 467385 | 33391789 ~ 33434651 (-) |
| AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | upstream | 564321 | 33488725 ~ 33513579 (-) |
| G16563 | NA | other | upstream | 1182286 | 34106690 ~ 34107941 (-) |
| AMCG00016938 | NA | other | upstream | 2471588 | 35395992 ~ 35399030 (-) |
