AMCG00016876 (dcakd,LOC107667188)


Basic Information

Item Value
gene id AMCG00016876
gene name dcakd,LOC107667188
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33141438 ~ 33148429 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016876
GAGCAGGAAACGGTATCAAAGAAGTCCCCAAGAAAAGAGGAGGATGTTCCTGGTCGGGCTGACAGGCGGGATAGCGTCGGGGAAGAGCACAGTCTCCGCTGCCCTGCGGGAGCTGGGCTGTGCAGTCATCGATGCGGACGTGGTAGCCAGACAAGtggTGCAGCCCGACAGCCCAGCCTACAGGCTGATAGTGCAGCACTTCGGCCCAGAGATCCTCCTAGAGAGCGGGGAGATTGACCGCGAGAAGCTGGGCAGTATCATCTTCTCCATCCCAGAAAAGCGCAGGCTGCTCAACTCGCTCACACACCCCGAGATCCACAAGGCCATGCTCAAACAGATCCTGACGTTCTTCCtgagagGGTACCGTTATGTAATCCTGGACGTGCCCCTGCTCTTTGAGACCCGCCGGCTCACTCGCTTCCTCAAGCACACCGTGGTGGTGTACTgCGATCCAGCCACCCAGCTGTCTCGTCTGATGCAGCGTGACGGTCTGACACAGGAGCAGGCCGAGATGCGCGTCGGCGCCCAGATGCCCCTGAACGAGAAGCGCGGGCTGGCTAGCCACGTCATTGAAAACTCGGGCGGTCGCGAGGACACCCACAGGCAGGTCCTCCGGCTCCACACCCAGCTGGAGGACTCCCTGGACTTCCTGCTGGTCAGGGCCCTCGCCGTCACTCTGGCAACCGGGCTAGGGGGCCTAGTCCTGTTCACCCTCAAGCAGCTCGTCTCCTAGCAAAGGCCACCAATGAGACAGCTGCACAGATTGCTGGCAAACACTGGTCTTGCCCTGGTTGTGTGGAATGGAAACAGCAAACTGTGCCCGCATGAATTGGCACTACACACCTACCTAAAGTTTTTAGAAATCtaacttgttttaatattttcaattttaatgaaCGCCTGTGGATTGACGGTGTTTCCTCTATCTTCTTTTGAGCTCTGTTGGAATGTAACCAGACTGTGAAAGAGTTCTAGCATCAGGGACAGGGAATAAATAGGTGATTCTGTCTTTATTCAGTAGGGTGAAGACTGAGTACAGGCTGTCTGTAGAATTAGGCTCACTACTTTTTCAGACTTTGATTCCTTATCTGGGCCTAAAATGAGTGTAAGGGCATATTTGCcttttataattgtaaaatgttttgtttaagccAATTTCACACACTTGTTAATTGCACTATTTGACTGTTTGGGGGACAACAAGCTTGTCTTTTAGCCGTGATATCTCTGCCAGTGAGCTGTTCAACCACACAAACTGGGAGCGAGATGCGTCTTGGGAGTCTTCCTGACAAACAGTCCAAAAAGAGAGATCATCATTATATCTCATTTGCATTCTCGGATCATATTGAATCAGCAGTCACCCTGGTGCAATTGTCTTTCAGCAGGCAGGAAACACGGCACAGGTTCCTTGGTGGTGGTATGTGCTGGGATATTAAGATGTTTTAAtgaaagagaagtattttagttttaaatgccTGGGGTTAAAACGGGGGCTGTGCTGGGAAGGAGCAAGCATGATCGAAATCTTTCCCTCATGGGTTTtgactttctttaaaaaaagtaatcagTTGTGATCATAGCACAGTGACTTGCATGGATTGCATATCATCTGGAACTGCATCATACCTCATGGATTAACCaagtcatttttttcctttgtttttaaaaataattattcaatgtGAAGAACAAGCAGACCTGCCGGGGAGTCAAACAGGAGACACAGTATGGGAGAATATGAAGTCCAGTCCAGTAGTGCAACAGGTCTTGGAGTTTCAGAACTATATTTACACATGGAAAGCAGTGGGGGTTTTCAATTATGGAAATACAGGAATTGACAGAAGACTGGTGTGGACTAGATACAGAAGAAGGAAGATAAGAAGCAACAGAAGGGAACAAAAGGGATAGCCTCAATAACCCGTGTCATAAAACCAACATACAAGAAAGTTGCTATTATTTCGGTTTCTGAACTTGATCTATCCCTCCATACTGATGAGAAAAGCTGATCGAGAGCCATGAAGAAAGGGCCTGAAGAGACCCTCGGGTCAATTGGCTGGTGGCAACGGAATGAGCAAGACTGGCTGAGCAGCGTCCTGTCGTTCTTGGACCCTGCTCTCGTTCCCAGGTGCCTACTGTTTGGTCTTAGAGTCATTCCCAGCTGAGTGCAATGTGAGGAGATGggttaaaacttatttttagtGCTGCTACTTTTACCTAAAGCTCCCACGCAGGGTCTGTATTATTTGCTGCCAGTCACAACTTTCATGTGAAGACTTATGATGTAATTTGTTcataaaat

Function

symbol description
dcakd Predicted to enable dephospho-CoA kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DCAKD (dephospho-CoA kinase domain containing).

NR:

description
PREDICTED: dephospho-CoA kinase domain-containing protein

GO: NA

KEGG:

id description
K00859 coaE; dephospho-CoA kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016876 True 2299 mRNA 0.48 5 33141438 33148429

Neighbor

gene id symbol gene type direction distance location
AMCG00016869 NA coding downstream 206932 32931693 ~ 32934506 (-)
AMCG00016870 NA coding downstream 210625 32927031 ~ 32930813 (-)
AMCG00016871 NA coding downstream 217034 32922429 ~ 32924404 (-)
AMCG00016868 NA coding downstream 219189 32921005 ~ 32922249 (-)
AMCG00016867 NA coding downstream 269913 32863246 ~ 32871525 (-)
AMCG00016878 NA coding upstream 6854 33155283 ~ 33160959 (-)
AMCG00016877 pus3 coding upstream 20201 33168630 ~ 33171933 (-)
AMCG00016879 NA coding upstream 43273 33191702 ~ 33195256 (-)
AMCG00016884 ccdc47,LOC107674171,LOC107658463,LOC107729550,LOC107721963 coding upstream 159312 33307741 ~ 33318582 (-)
AMCG00016888 NA coding upstream 185033 33333462 ~ 33348062 (-)
G16325 NA non-coding downstream 156974 32984254 ~ 32984464 (-)
G16293 NA non-coding downstream 279841 32859241 ~ 32861597 (-)
G16292 NA non-coding downstream 283973 32854781 ~ 32857465 (-)
G16250 NA non-coding downstream 704755 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 713358 32427852 ~ 32428080 (-)
G16375 NA non-coding upstream 107224 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 135585 33284014 ~ 33284227 (-)
G16378 NA non-coding upstream 143602 33292031 ~ 33292249 (-)
G16422 NA non-coding upstream 176657 33325086 ~ 33328341 (-)
G16502 NA non-coding upstream 479671 33628100 ~ 33628919 (-)
AMCG00016859 NA other downstream 634119 32497507 ~ 32507319 (-)
G16247 NA other downstream 718000 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 873470 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1753170 31380547 ~ 31388268 (-)
G15787 NA other downstream 2611938 30526292 ~ 30529500 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 27647 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 243360 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 340296 33488725 ~ 33513579 (-)
G16563 NA other upstream 958261 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 2247563 35395992 ~ 35399030 (-)

Expression


Co-expression Network