AMCG00016879


Basic Information

Item Value
gene id AMCG00016879
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33191702 ~ 33195256 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016879
ATGGTTGAAAAAATAGCATGGGTCAAGTTCCTCTTCACCTTCTTCAATGGCATGTTCTGGgTGTCTGGGATCACCCTGATTGCGGTGGGTGCATTGTCACGTACCTCCTACACAGAGCTCGAGGCCTTCACTGGGGGCGGGCTCACCCACGCCGCCATCCTTCTCATTGTCCTGGGTGTGGCCATCTCCGTCTTCGCCTTCGTGGGATGCATGGGGGTGTGGTCAGACAGCCTCCTGCTGCTTGGGTTGTTCACAGGCATTCTTATACTGATCCTCACCCTCGAGATCCTGGCTGGCATTCTCTTCACTATCTTCCGAGCCAAGGTGGAGAAGAAAATCACAAGGAAAGCCAAGGAGGTGTTCAAGAAATATGGCAGTAAGAACAGAGCTCTTATTGATGACATTCAGGACCAGTTCCACTGTTGCGGAGCTGTGAACTACACTGACTGGTTTGAGAGTGAGGGCTGGCACAATCACAGCATGGTGCCTGATTCCTGCTGCCTGGTGGAGAAGGAGGCCTGCGGTCTAAACCTCTCCCCGGCCAGTATCTACAGAAAGGGCTGTGTGGAGTCAGTCAAGGAGTTTCTGAAAAGCAATCTGGTTTGGATTGGAGGGGCCTGCATCACACTGGGGATCATTGAGATTCTTGGAGCTTTTCTGGGCATGTGTCTGCTCCAGAACATCCTCAAGACACACCACTACCAGGTCATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016879 True 714 mRNA 0.52 7 33191702 33195256

Neighbor

gene id symbol gene type direction distance location
AMCG00016877 pus3 coding downstream 19769 33168630 ~ 33171933 (-)
AMCG00016878 NA coding downstream 30743 33155283 ~ 33160959 (-)
AMCG00016876 dcakd,LOC107667188 coding downstream 43273 33141438 ~ 33148429 (-)
AMCG00016869 NA coding downstream 257196 32931693 ~ 32934506 (-)
AMCG00016870 NA coding downstream 260889 32927031 ~ 32930813 (-)
AMCG00016884 ccdc47,LOC107674171,LOC107658463,LOC107729550,LOC107721963 coding upstream 112485 33307741 ~ 33318582 (-)
AMCG00016888 NA coding upstream 138206 33333462 ~ 33348062 (-)
AMCG00016887 kcnh6a,LOC106601567,LOC105012970,LOC108427397,LOC106527280 coding upstream 186628 33381884 ~ 33390755 (-)
AMCG00016893 map3k3,LOC102777599 coding upstream 244296 33439552 ~ 33473811 (-)
AMCG00016894 NA coding upstream 278754 33474010 ~ 33479455 (-)
G16325 NA non-coding downstream 207238 32984254 ~ 32984464 (-)
G16293 NA non-coding downstream 330105 32859241 ~ 32861597 (-)
G16292 NA non-coding downstream 334237 32854781 ~ 32857465 (-)
G16250 NA non-coding downstream 755019 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 763622 32427852 ~ 32428080 (-)
G16375 NA non-coding upstream 60397 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 88758 33284014 ~ 33284227 (-)
G16378 NA non-coding upstream 96775 33292031 ~ 33292249 (-)
G16422 NA non-coding upstream 129830 33325086 ~ 33328341 (-)
G16502 NA non-coding upstream 432844 33628100 ~ 33628919 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other downstream 12819 33176076 ~ 33178883 (-)
AMCG00016859 NA other downstream 684383 32497507 ~ 32507319 (-)
G16247 NA other downstream 768264 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 923734 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1803434 31380547 ~ 31388268 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 196533 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 293469 33488725 ~ 33513579 (-)
G16563 NA other upstream 911434 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 2200736 35395992 ~ 35399030 (-)
G17032 NA other upstream 4562901 37758157 ~ 37758471 (-)

Expression


Co-expression Network