G14136


Basic Information

Item Value
gene id G14136
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24336970 ~ 24338848 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17511
CGTGTTGAACGGGGATCGTTTATTGTTTGCACATGCTGAAGTCGTTCATGCACCATGTCTACAATaattacacaacaaaataattgcGGTGGATTGCTTTTTATACAGAAACAGGATGAAACACAGGATATCATATTCAGCAATCTCCAGACAAGATTCTCGCATGTTCCATGAAGCCAGGTTCGGAAGACCCCCGCGAGGCTCGTCACGTTCCAAGAAAACATGTTCTCCTCAGCCATTTCTTTTCCccaaacacattacaaaaaaacccaaacaaaaccaaaaataaatacaaataaaaaccgAGAGatacgcacacgcacacacacaccaacagtTCACTACACCTACAGGTCTAACTACAGgttgatttgagaggctaaGGAAACACTTTTTAGTCTTGCCTAAATACTTTGTAACGCTTTGAAAGCGCTTCACACGACGGATGTCAGACAGCGAGGGTCCTCTGCAGATGCACGGGAGGCGTGGCACGGAACTTCTACGCATTAGAAAAACTGGATTCGTCTGACTTGAGAGACGGGATATGGCACACATGCTACACATCTGAGTTTCGTCAAAGCAAAGCGACAGATAGGATACGGGGCGGCGCTGGGCTTCGCTCTCCCGTCCTTGGAAGCGGCGTCTTGCCCAGAAAGCTCAGCAGGTCAGGAGCGTGGAGGAGCGTTGAGTCTTAGGTTTGCTTCTGTCCTTTATAAGTGTAGACCTGCTGCCCTAACATCCTTCAGCCCCAAACAGGATTACTATGAGTTTATTTTAACCCCCCTGTAGCGGTAAATATCAAAGGAGTGGCTGCTGTGTGAGTTTGAGAGATTAAACTGTGCAGGCGACATAGCGGCAGCAGTCAGAAGGACCAAACCAGACCCACgtgaaggaaggaaggaaggaaggaaggaaggaaggggaaagaaaaccgccattttatgttgttgtcATCATCTTGTTTTTtagagtgaaaaaaacaaacggaGGAATCTATTATTAGTTTTCTGCCATTTTCGGAGGTTGGCCAGGGGTTTAAACCCTGCACGGGCAGGGCGGAGTGAGGGATTGATGTGGCAGAGCAGTAGAAGAGCAGGACCGATCGCTACGAGTCATCAGGCCTGTGGAAACGTCAGTCCTGATACCTGTCGTCTGTGTCATCATTTCACTGTACTTTAAACCTCACATTTGCACATCCACGATACACATTTCCACACATACGGCAGCCCCTCCATCACCCACACGCCTGGACCGCTTGCAGAACATTACAGAACACCCCCTGGCTTTAGGAACTTTAGGTCTTGCTTCGTTTCGTAATTTACATGTTCCTCAAGGgacatttattatatacacatacatatatgtatatgtatgtatatatacacacatatatatacatatatatatatatatatatatatatatatatatacatatacattatatataataaaatactccctccttcaaaaataaaaacaaagcaataaacaTAATCCTGTCACAGTGGTGGTTTCTTGATGTCACCTGCAATAAATATGTCGAAACCagaacaaatgaaataaaactaaatatatataacaaaaataacatcttCATCTGCGAGTccctataaacacacacagctgtccTCCTGACTGCTGTCATGGCGAAGTGGGTTCAGGGTTTCTGCTCTGATGCACATTATTAGCGGAGTGCGGATTCAGAGGGAGATAAAACTACATTCAGCACTGCTCTCCTGCCCCCCGTGCCCGGCGCCGGCAGGACGAGGAATCCCCCGCTGTACCCGCCTGAGCGCGGCGCTGCCCGTCTCCAGAGCCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17511 True 1823 lncRNA 0.45 2 24336970 24338848

Neighbor

gene id symbol gene type direction distance location
AMCG00016529 NA coding upstream 143 24324950 ~ 24336827 (+)
AMCG00016519 NA coding upstream 218597 24104905 ~ 24118373 (+)
AMCG00016520 naa50,LOC107732992,LOC106590472,LOC106579447 coding upstream 235405 24089830 ~ 24101565 (+)
AMCG00016515 NA coding upstream 259684 24073722 ~ 24077286 (+)
AMCG00016516 NA coding upstream 307014 24022414 ~ 24029956 (+)
AMCG00016536 NA coding downstream 230280 24569128 ~ 24580184 (+)
AMCG00016541 sms,LOC106603082,LOC107700049 coding downstream 243129 24581977 ~ 24597847 (+)
AMCG00016542 LOC107663624 coding downstream 262852 24601700 ~ 24617531 (+)
AMCG00016540 NA coding downstream 330364 24669212 ~ 24683200 (+)
AMCG00016547 NA coding downstream 361897 24700745 ~ 24712231 (+)
G14132 NA non-coding upstream 15651 24317800 ~ 24321319 (+)
G13979 lipt2 non-coding upstream 471170 23862215 ~ 23865800 (+)
G13953 NA non-coding upstream 989258 23347427 ~ 23347712 (+)
G13949 NA non-coding upstream 1011210 23325560 ~ 23325760 (+)
G13943 NA non-coding upstream 1224805 23111926 ~ 23112165 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding downstream 31478 24370326 ~ 24375827 (+)
G14177 NA non-coding downstream 80510 24419358 ~ 24419607 (+)
G14354 NA non-coding downstream 783235 25122083 ~ 25122392 (+)
G14363 NA non-coding downstream 805734 25144582 ~ 25144782 (+)
G14383 NA non-coding downstream 930990 25269838 ~ 25270195 (+)
G14057 NA other upstream 226788 24080017 ~ 24110182 (+)
AMCG00016506 NA other upstream 391946 23938051 ~ 23945024 (+)
AMCG00016502 NA other upstream 454024 23866267 ~ 23882946 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 2504822 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 4457245 19875056 ~ 19879725 (+)
AMCG00016537 NA other downstream 140858 24479706 ~ 24561807 (+)
G14326 NA other downstream 669114 25007962 ~ 25010687 (+)
AMCG00016558 rpl21,LOC107591224 other downstream 741826 25080674 ~ 25085097 (+)
G14361 NA other downstream 794350 25133198 ~ 25133879 (+)
AMCG00016566 NA other downstream 811500 25150348 ~ 25157461 (+)

Expression


Co-expression Network