G17421


Basic Information

Item Value
gene id G17421
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 41216651 ~ 41217231 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21619
tgtagatcacgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaagtagatggattatgaaccggttgatgtataggaaacagagggtgtcgattagaggagtcacttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctaatctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagatgatactaaaataggtggctcagcagatacaatcttggcagcacaagctattcagagggacttagataatattcagttgggggctgacacctggcaaatgaaattcaatgtgaacaagtgcaaggtaatacatgcaggtaacaaaaatgtccactataattacactatgggaggtacagatctagatgaagtaacgcatgagaaagacctaggagtctacgtggactcctcactttctccatccaagcaatgtggggaagcaataaaaaaggcaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21619 True 581 TUCP 0.40 1 41216651 41217231

Neighbor

gene id symbol gene type direction distance location
AMCG00016993 LOC106583731,LOC105007334,LOC107661916 coding downstream 108490 41106691 ~ 41108161 (-)
AMCG00016991 LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731 coding downstream 177977 41037352 ~ 41038674 (-)
AMCG00016990 LOC103368898 coding downstream 225991 40989266 ~ 40990660 (-)
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding downstream 328071 40888359 ~ 40888580 (-)
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding downstream 1361537 39827240 ~ 39855114 (-)
AMCG00016999 NA coding upstream 311425 41528656 ~ 41530149 (-)
AMCG00017002 gmppb coding upstream 369892 41587123 ~ 41596403 (-)
AMCG00017001 ip6k1 coding upstream 388184 41605415 ~ 41609900 (-)
AMCG00017004 NA coding upstream 456524 41673755 ~ 41702096 (-)
AMCG00017007 arhgef3 coding upstream 496580 41713811 ~ 41733567 (-)
G17414 NA non-coding downstream 338586 40873372 ~ 40878065 (-)
G17384 NA non-coding downstream 931828 40280538 ~ 40284823 (-)
G17383 NA non-coding downstream 950390 40264597 ~ 40266261 (-)
G17364 NA non-coding downstream 1415811 39794975 ~ 39800840 (-)
G17325 NA non-coding downstream 1819796 39394493 ~ 39396855 (-)
G17423 NA non-coding upstream 27695 41244926 ~ 41245225 (-)
G17505 NA non-coding upstream 384693 41601924 ~ 41605395 (-)
G17755 NA non-coding upstream 1327129 42544360 ~ 42549418 (-)
G17754 NA non-coding upstream 1333094 42550325 ~ 42551773 (-)
G17910 NA non-coding upstream 2018574 43235805 ~ 43236036 (-)
AMCG00016959 NA other downstream 3157712 37875250 ~ 38058939 (-)
G17032 NA other downstream 3458180 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 5817621 35395992 ~ 35399030 (-)
G16563 NA other downstream 7108710 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 7703072 33488725 ~ 33513579 (-)
AMCG00017014 NA other upstream 719695 41936926 ~ 41938563 (-)
G17842 NA other upstream 1591480 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 1731760 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 2063006 43280237 ~ 43286603 (-)
AMCG00017060 NA other upstream 2088466 43305697 ~ 43308626 (-)

Expression


Co-expression Network