AMCG00017429


Basic Information

Item Value
gene id AMCG00017429
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4189248 ~ 4199454 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017429
ATGACTTTTTCTCACTCCATCAATAAGAGCTTTAGTGGAAATGACTCCAATGGCACCATTCACCAATCTTTCCGGGATCTCCTTCTTCCCAATATCAGCGACAATACCTATATGAACCTGACACTGGATCCTCAAGCCATAGGGGTAGGggtgtttctgtctgttttcatCTTATTCGCTATTGTGGGGAACATCATGGTGATACTTTCTGTGGTTTGCAACAAACACTTGCAGACAGTCACGAACTATTTCATCATTAACCTTGCCATAGCCGACTTACTGCTGAGCACCATCGTCCTACCTTTCTCTGCCTCTCTAGAGGTGCTGGGAGGCTGGGTCTTTGGCAGGATATTCTGCAACATCTGGGCTGCGGTGGATGTGCTCTGCTGTACCGCCTCTATCATGAGCCTGTGTATAATCTCAATAGACAGGTACATTGGAGTGAAGTATTCCCTGAAGTACCCCACTATCATGACAGAGAAGAAAGCGGTGGTCATCTTGATAGTTGTCTGGGTCTCCTCTATGGTTATCTCTATAGGACCACTGTTGGGTTGGAAGGAACCACCGCCGACAGACGAGCGCATCTGTAAGATCACCGAAGAGCCGGGCTATGCCCTCTTCTCgtccttgttttctttctacctTCCTCTCCTGGTCATCCTGGTGATGTATTTCAGGATCTACGTTGTAGCCAGGAGGACAACTAAGAGCCTGGAAGCAGGGGTGAAAAGGGAGAGGAATAAGTCCATGGAAGTGGTGCTGAGGATCCACTGCAGAAGCGTCCTAGAAGAAAGCGCCAAGAGTAAAACCCATCCTTTCCGAAGTTCTCTCTCCGTGCGCCTCCTGAAATTCTCCAGAGAAAAGAAAGCTGCTAAGACCCTGGCCATAGTTGTGGGGGTGTTCATTCTCTGCTGGTTGcctttcttctttgttttgccTCTAGgcTCATTTTTCCCAGCTTTGAAACCCTCTGAAATGGTGTTCAAAGTTATCTTCTGGCTGGGGTATTTCAACAGTTGTGTCAACCCCATCATTTACCCCTGCTCTAGCAAAGAGTTCAAAAGAGCTTTCATAAGAATCCTGAAGTGTCAGTGCCGCAGACGCAGGAGGTCTCTGTGGAGGTTTTATGACCAGAGATGGCGGACTTCAATCAGCAGTTCGGGGCAGGCCTCTTGTGGAGACATCAAGCCCCGATTTTCATTCAGAGAATCCTTTTCACTCAACAACTCTTTCctttacaacagcaagaggactcTTAGCATCCAGGGATGGAGTTTCTTCCCACCTTTACAGAGGTCGTCTTTTCAGCTGAAAGAAAAGATGAACAATCTCTCAAATAAGATCAAAAACCGTCCCAATAAGAGCTCTGTGCCTGCACTAGGTAAAGCTGAAATCGATTCGATTTCCATGGGGATCTGCAGTGATTTTGCAGAACAGAATGATTATCAGATATATGATCTAACAGACTGCTATGGTCTGAAGGAGACTGATATTTAG

Function

GO: NA

KEGG:

id description
K04137 ADRA1D; adrenergic receptor alpha-1D

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017429 True 1497 mRNA 0.47 2 4189248 4199454

Neighbor

gene id symbol gene type direction distance location
AMCG00017428 lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618,LOC107711523 coding upstream 620528 3567260 ~ 3568720 (+)
AMCG00017427 NA coding upstream 707526 3275663 ~ 3481722 (+)
AMCG00017423 suclg1,LOC107674246,LOC106602756 coding upstream 1462421 2713157 ~ 2726827 (+)
AMCG00017420 NA coding upstream 1476775 2709071 ~ 2712473 (+)
AMCG00017421 NA coding upstream 1480605 2696109 ~ 2708643 (+)
AMCG00017439 rnf24,LOC107689472 coding downstream 183878 4383332 ~ 4384747 (+)
AMCG00017449 NA coding downstream 428761 4628215 ~ 4633610 (+)
AMCG00017450 NA coding downstream 490424 4689878 ~ 4691955 (+)
AMCG00017451 NA coding downstream 661920 4861374 ~ 4868470 (+)
AMCG00017454 NA coding downstream 685507 4884961 ~ 4900663 (+)
G90284 NA non-coding upstream 291123 3897818 ~ 3898125 (+)
G90248 NA non-coding upstream 951522 3237445 ~ 3237726 (+)
G90149 NA non-coding upstream 1660447 2491907 ~ 2528801 (+)
G90144 NA non-coding upstream 1685084 2461882 ~ 2504164 (+)
G90070 NA non-coding upstream 2184642 2003038 ~ 2004606 (+)
G90333 NA non-coding downstream 112804 4312258 ~ 4312475 (+)
G90337 NA non-coding downstream 130916 4330370 ~ 4330583 (+)
G90338 NA non-coding downstream 185787 4385241 ~ 4390541 (+)
G90413 NA non-coding downstream 498484 4697938 ~ 4710074 (+)
G90436 NA non-coding downstream 701568 4901022 ~ 4910792 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 1493795 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 3977312 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 4090851 48007 ~ 98397 (+)
AMCG00017445 NA other downstream 393348 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 463171 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 2530284 6729738 ~ 7188643 (+)
G90877 NA other downstream 3468729 7668183 ~ 7671850 (+)
G90881 NA other downstream 3493131 7692585 ~ 7693347 (+)

Expression


Co-expression Network