AMCG00017599 (stk32b,stk32a,LOC108414397,LOC108278444)


Basic Information

Item Value
gene id AMCG00017599
gene name stk32b,stk32a,LOC108414397,LOC108278444
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 12924850 ~ 12931836 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017599
ATGTACGCAATGAAGTACATGAACAAACAGAAGTGCATTGAGAGAGATGAAGTCCGTAATGTCTTCAGAGAACTACAGATAATGCAGGGCCTGGAGCATCCCTTCCTTGTCAACCTCTGGTTAGTAAAGCAGTACTCATTTCAAGATGAAGAAGATATGTTCATGGTGGTAGATCTTCTACTTGGGGGAGATTTACGCTATCACTTACAGcagaatgtgcattttaaagaagaaactGTGAAACTTTACATCTGTGAATTAGCACTAGCTCTGTATTACTTGCAATGCTGCCATATAATCCAT

Function

symbol description
stk32a Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to several human genes including STK32A (serine/threonine kinase 32A).
stk32b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation.

NR:

description
PREDICTED: serine/threonine-protein kinase 32B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017599 True 303 mRNA 0.40 2 12924850 12931836

Neighbor

gene id symbol gene type direction distance location
AMCG00017596 msx1a,msx1,LOC107682425 coding upstream 59221 12864376 ~ 12865629 (+)
AMCG00017593 NA coding upstream 197234 12721241 ~ 12727616 (+)
AMCG00017592 NA coding upstream 207450 12712157 ~ 12717400 (+)
AMCG00017586 NA coding upstream 359762 12546369 ~ 12565088 (+)
AMCG00017584 wdr1,LOC106565198,LOC106583413 coding upstream 403787 12506590 ~ 12521063 (+)
AMCG00017597 NA coding downstream 19496 12951332 ~ 12970031 (+)
AMCG00017595 NA coding downstream 129905 13061741 ~ 13078027 (+)
AMCG00017610 NA coding downstream 439779 13371615 ~ 13383451 (+)
AMCG00017608 NA coding downstream 487960 13419796 ~ 13422446 (+)
AMCG00017609 NA coding downstream 496312 13428148 ~ 13429174 (+)
G91619 NA non-coding upstream 33494 12865187 ~ 12891356 (+)
G91597 NA non-coding upstream 214134 12707310 ~ 12710716 (+)
G91549 NA non-coding upstream 434554 12490083 ~ 12490296 (+)
G91545 NA non-coding upstream 488866 12435744 ~ 12435984 (+)
G91490 NA non-coding upstream 949238 11975409 ~ 11975612 (+)
G91649 NA non-coding downstream 128020 13059856 ~ 13060646 (+)
G91683 NA non-coding downstream 208826 13140662 ~ 13140878 (+)
G91726 NA non-coding downstream 590805 13522641 ~ 13526149 (+)
G91727 NA non-coding downstream 596945 13528781 ~ 13533210 (+)
G91740 NA non-coding downstream 926381 13858217 ~ 13913757 (+)
G91452 cc2d2a other upstream 1044351 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 3341570 9519773 ~ 9583280 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 4159947 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 4224096 8687697 ~ 8700754 (+)
G90955 NA other upstream 4791996 8132368 ~ 8132854 (+)
AMCG00017600 NA other downstream 265059 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 849430 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 1093800 14025636 ~ 14039063 (+)
G92046 NA other downstream 2145489 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 2156296 15088132 ~ 15090829 (+)

Expression


Co-expression Network