Gene
RNA
| Item | Value |
|---|---|
| gene id | G90731 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 6728032 ~ 6763072 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002376 | immune system process | biological_process |
| GO:0045321 | leukocyte activation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU113180 | True | 326 | lncRNA | 0.49 | 2 | 6728032 | 6763072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017478 | LOC106611628 | coding | upstream | 327627 | 6382359 ~ 6400405 (+) |
| AMCG00017479 | fat4,LOC106604622,LOC102795788 | coding | upstream | 357380 | 6361359 ~ 6370652 (+) |
| AMCG00017477 | fat4 | coding | upstream | 410145 | 6312782 ~ 6317887 (+) |
| AMCG00017480 | NA | coding | upstream | 776240 | 5950836 ~ 5951792 (+) |
| AMCG00017475 | NA | coding | upstream | 911034 | 5808828 ~ 5816998 (+) |
| AMCG00017484 | NA | coding | downstream | 81487 | 6844559 ~ 6844962 (+) |
| AMCG00017483 | NA | coding | downstream | 81903 | 6844975 ~ 6846106 (+) |
| AMCG00017488 | eif2ak3,LOC107683275,LOC106611393 | coding | downstream | 477371 | 7240443 ~ 7279492 (+) |
| AMCG00017491 | pik3c3 | coding | downstream | 695992 | 7459064 ~ 7475022 (+) |
| AMCG00017494 | NA | coding | downstream | 842216 | 7605288 ~ 7606199 (+) |
| G90709 | NA | non-coding | upstream | 325844 | 6401734 ~ 6402188 (+) |
| G90703 | NA | non-coding | upstream | 444591 | 6283157 ~ 6283441 (+) |
| G90691 | NA | non-coding | upstream | 749664 | 5978164 ~ 5978368 (+) |
| G90647 | NA | non-coding | upstream | 1050788 | 5676901 ~ 5677244 (+) |
| G90561 | NA | non-coding | upstream | 1264968 | 5440212 ~ 5463064 (+) |
| G90737 | NA | non-coding | downstream | 111895 | 6874967 ~ 6892610 (+) |
| G90738 | NA | non-coding | downstream | 120582 | 6883654 ~ 6883957 (+) |
| G90733 | NA | non-coding | downstream | 211589 | 6974661 ~ 7011061 (+) |
| G90743 | NA | non-coding | downstream | 349344 | 7112416 ~ 7152744 (+) |
| G90857 | NA | non-coding | downstream | 861620 | 7624692 ~ 7626452 (+) |
| AMCG00017446 | NA | other | upstream | 2039809 | 4662625 ~ 4688223 (+) |
| AMCG00017445 | NA | other | upstream | 2121461 | 4592802 ~ 4606571 (+) |
| AMCG00017422 | leprotl1,LOC103152176 | other | upstream | 4032579 | 2687420 ~ 2695453 (+) |
| AMCG00017388 | LOC108267694,LOC106608525 | other | upstream | 6516096 | 207586 ~ 211936 (+) |
| AMCG00017386 | dctn1,LOC101464740 | other | upstream | 6629635 | 48007 ~ 98397 (+) |
| G90877 | NA | other | downstream | 905111 | 7668183 ~ 7671850 (+) |
| G90881 | NA | other | downstream | 929513 | 7692585 ~ 7693347 (+) |
| AMCG00017508 | NA | other | downstream | 1043306 | 7806378 ~ 7813639 (+) |
| G90955 | NA | other | downstream | 1369296 | 8132368 ~ 8132854 (+) |
| AMCG00017526 | paics,LOC107555752 | other | downstream | 1924625 | 8687697 ~ 8700754 (+) |
