G91363


Basic Information

Item Value
gene id G91363
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 11290288 ~ 11291576 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113973
TCAGTCAAACAGGGCACCTTTATTGTACTGTAAGGACAGCGGTGCACCTTACTCTTTTACAGTCCGTAGAGTGATACAAGCTCTTGCTTCCTCTATAAATGTGAGCTTTAACAGTTCCTCTATCAACCTGCAAAGGCTTTAAACATTTAACCCCcccaaagaacaaacaaaaaaaagattccgcttgaaaaatacaatgatttaaCCAGTCCATTCCggggtattttattattagttcatTTAATCTGTGAAAGGGTCTGATGGCaagactgagtgactgacttCACGAACCTGGCTTATCCTTGGATACATACTGCAGGATCTTTGCCCAGGGTATTGAACACCAGGTCATGTGACTGTCCCTGTTTATTTAGTGCTTCGATTGTTTGTCTTCTGTGCCCACTGATATCTTGGATTGTTTACTTTTCAGGCACTGCTTTGGCAGCGAGGCCAGCAGGCTTGGGGATTATATCCTGTTTTGGCAGAGATATGCTAACACCTCTGCATAGTTTCTGTGGGAGGCAATGCTTCTGCAGGTGCTTCTATTTAAACAGGATGTAAATGAGAGAATTGTGCTTCAGGGAaccgttttttttatttgtacttttttccccctctaaCTTCAGATCACCcataatttagaaaaaataacgTTTTAATGCATGAAAGACTTTTGGCTCCTTGTGATAACtaggataaataaaatacatgccGTCATGGGCATAAAGatttttatggattttatgaataaatagatCTCTTCCAAGCATGTCAAAATGTATAGCTTTTTCTCTGTTATTTCATTGATTAATGTTTCCAGAAGGAAGGTTATGTTCTTGTTTGCACATGCAAAATCTTGATGACATGATCATcccaaatttgaaaataaaatcactcaGCAGGGCATTAAAGACATCTAATAGACATACAGTGCCTCAAATATCACAATTTTAGggaattaaaaagaagaaataccaatataaaaatgtcagtaattcaaaaacaaaacgaagGAACCTTATGCAATAGTTTTCTTTTAACTACAAGATTTAGTGTAGTTCTCTAGAATAGAGTTCCTAGATCAAATATCCAGCCCAGTATAAAGGGTTTCATTGACTTATACATATAGGTGATGCTCTTCAATTCACTTTAATTGAATGTGTAACTCTCAGAGTTCAGGaattaagttaatatttttgttcACACAAACTATTCATATGTAAATTCTCAAAATAGACTTGAATGTCAACAACAATCAGAAAAATGCAATGATTTGCtttcacatttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113973 True 1289 lncRNA 0.36 1 11290288 11291576

Neighbor

gene id symbol gene type direction distance location
AMCG00017552 NA coding upstream 1394855 9893228 ~ 9895433 (+)
AMCG00017553 NA coding upstream 1621312 9630401 ~ 9668976 (+)
AMCG00017551 NA coding upstream 1918093 9257206 ~ 9372195 (+)
AMCG00017545 NA coding upstream 2142949 9127763 ~ 9147339 (+)
AMCG00017544 NA coding upstream 2187085 9086577 ~ 9103203 (+)
AMCG00017560 NA coding downstream 98613 11390189 ~ 11402671 (+)
AMCG00017561 NA coding downstream 216300 11507876 ~ 11525014 (+)
AMCG00017562 fbxl5,LOC106674637 coding downstream 575589 11867165 ~ 11879473 (+)
AMCG00017577 NA coding downstream 732680 12024256 ~ 12024505 (+)
AMCG00017578 NA coding downstream 732957 12024533 ~ 12029958 (+)
G91361 NA non-coding upstream 2125 11287861 ~ 11288163 (+)
G91353 NA non-coding upstream 222273 11067713 ~ 11068015 (+)
G91341 NA non-coding upstream 499620 10790302 ~ 10790668 (+)
G91339 NA non-coding upstream 500399 10789598 ~ 10789889 (+)
G91334 NA non-coding upstream 525952 10740103 ~ 10764336 (+)
G91386 LOC106577485 non-coding downstream 116718 11408294 ~ 11415102 (+)
G91387 NA non-coding downstream 124945 11416521 ~ 11416740 (+)
G91480 LOC107549164,LOC106560248,LOC106584219 non-coding downstream 644051 11935627 ~ 11935961 (+)
G91481 NA non-coding downstream 644525 11936101 ~ 11936339 (+)
G91490 NA non-coding downstream 683833 11975409 ~ 11975612 (+)
G91281 LOC103376870 other upstream 1707008 9519773 ~ 9583280 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 2525385 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 2589534 8687697 ~ 8700754 (+)
G90955 NA other upstream 3157434 8132368 ~ 8132854 (+)
AMCG00017508 NA other upstream 3476649 7806378 ~ 7813639 (+)
G91452 cc2d2a other downstream 588038 11879614 ~ 11880499 (+)
AMCG00017600 NA other downstream 1905319 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 2489690 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 2734060 14025636 ~ 14039063 (+)
G92046 NA other downstream 3785749 15077325 ~ 15084278 (+)

Expression


Co-expression Network