G94713


Basic Information

Item Value
gene id G94713
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32091420 ~ 32093044 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU118126
TTGTTTGAAAGCGTGGTAGACGTTCAGTAGTGTCAAATGATCCCCGTCTATGTGCGCAAACCTCATCTTGGCCTCATCGGCAGCTTTCTTTGCCTCCGTCGGGCGAACGAAACACTGTGGGACTAAACAAGGTTGGTATGGGCCCAACACAGACGCCCATATGGATGAGTCACGCATTCACAGACAGGGGAACAAGGCCTAGGCTAGATCAGATCACAGAGCTTAGGGCTGGGCAGGGAAGGGGGTCTCATGGGTCTCCGACTGCATGATGGACTGCCTACTACCTTGGGGGGGTTCAACACCTAACCACATCTGCAAGACAAGAGCGTTGACAAGACTACAGGACGGCAAGAGTTACTCGACTGCTGCCGGCGCTGCGTGTAGACGAGGGGCAATTTACACTTCCATTTCAAAACAGTGAGGCGGCTGACAGGAGTCGAGAGGAGGAAAATAAAGAGCAGACGGACGGACGGAAGAGAACAGAAAACtctcaggaaaaaaacacagaaattcGTACAGGACAACGTTTATGATGAGAAGGAAGagcatttgaaaggaaatgctTGAAAGGAGTTTGAGAGAGAGTCGATGTATCCTCATGTGAAAGAACAAATGCATGGATGAGCAGCTGGGTGAGATCGAGACAGACAGAGCCGTCGATGCAGAGGCGCATCCGGCACGACTCGTGAAATGGAAGGAGAGGTTCTGCCCTGCCCAGCGGCTCTGGGCCTGACCGGTTCTGTTGCTTTTTCAGTCAATAGAGAGGAAGCAATACTGAAAATGGAAGCACTACATTCAAAACCCACAATAATTGACATTCGTGCAGAAGTCCAATCTCTACAAAGGCTGCCGTTTGAGTTTTGAGTTTTCTGCGTTTGCGTTTCGTTTCCAGACGGACCCTCTGCGCTCCTCAGCTCTGCCGGCGCCGCGCACACACTGCCGTCTCGGCAACGGGCTCGGCAGAGAAAAAAGCCGGCGTACCAATTATTAATGCGCCCAGCACAGAGTCCGCTGGTCcgctctgtttttgttttctttcagaggCGTCTTTTTATCACAGCGAACAGTATTCTGCGTTGGCAGCCTCAAGTGCCAATACTACAGCGGCGGCAACCTGGAGTCGCACCGGCTATAAACTCATTAATCTGACACTACCAATCCTCTCCTCCAAACATCACTCTCTCCGGAGGGGGGAAAAGATCAAGACAAAGTGCTGATTAAAGCTTCACTAGTTCCATGAGAAGGACGCTGCTTAAAAACAacccttgaaataaataaaaatagaaaaaggtaAACCGGCGGACGAAAAAACAAGCCTACATCTACAAGCTGAGATACGTTTATTTCCCTGGACGAACGCTTTCCCTGGCATTACCTGACAGCATGGCCGTGATGGACAGGATCTCATTGGAACAGTTGAACTCGCAGCTGGCAATGACCATCTTGGCCAGCTGGGGGTCCAGGGGGAACTCGGCCATCATGGAGCCCAGCTCGGTCAGGTCTCCGTCGTCGTTCAGGGCGGCCAGGTAGTTCAGCAGCTCCAGGGCCCTCATGAGCGTCTCTGGGGCTGGACACACAA

Function

NR:

description
PREDICTED: oligodendrocyte transcription factor 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118126 True 1579 lncRNA 0.51 2 32091420 32093044

Neighbor

gene id symbol gene type direction distance location
AMCG00017985 NA coding upstream 345439 31740568 ~ 31745981 (+)
AMCG00017981 NA coding upstream 416383 31659901 ~ 31675037 (+)
AMCG00017982 NA coding upstream 441828 31645825 ~ 31649592 (+)
AMCG00017980 ampm1,metap1,LOC107556924,LOC107733733,LOC106600494,LOC107695030 coding upstream 470314 31609218 ~ 31621106 (+)
AMCG00017973 NA coding upstream 1434496 30656133 ~ 30656924 (+)
AMCG00017989 NA coding downstream 22117 32115161 ~ 32123373 (+)
AMCG00017996 NA coding downstream 88658 32181702 ~ 32186561 (+)
AMCG00018002 NA coding downstream 98705 32191749 ~ 32194198 (+)
AMCG00017995 LOC107558400,LOC106943316 coding downstream 119135 32212179 ~ 32217730 (+)
AMCG00017997 NA coding downstream 125665 32218709 ~ 32228691 (+)
G94681 NA non-coding upstream 191740 31898502 ~ 31899680 (+)
G94668 NA non-coding upstream 227218 31859994 ~ 31864202 (+)
G94664 NA non-coding upstream 323572 31767636 ~ 31767848 (+)
G94613 NA non-coding upstream 462107 31628605 ~ 31629313 (+)
G94609 NA non-coding upstream 467877 31622456 ~ 31623543 (+)
G94739 NA non-coding downstream 71775 32164819 ~ 32165297 (+)
G94763 slc1a1,LOC107691854,LOC107561518 non-coding downstream 140727 32233771 ~ 32237191 (+)
G94792 NA non-coding downstream 254418 32347462 ~ 32350363 (+)
G94858 NA non-coding downstream 424079 32517123 ~ 32535900 (+)
G94899 NA non-coding downstream 653780 32746824 ~ 32762583 (+)
AMCG00017978 NA other upstream 1259553 30819869 ~ 30831867 (+)
G94275 NA other upstream 2641073 29433412 ~ 29450347 (+)
AMCG00017910 NA other upstream 3444670 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 4394041 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 5093968 26992891 ~ 26997452 (+)
AMCG00018012 NA other downstream 314385 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 368254 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 414646 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 696397 32789441 ~ 32793604 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G76220 NA non-coding CI01000012 null 12043779 ~ 12044185 (+)
tiger barb (Puntius tetrazona) G58835 NA unknown NC_056705.1 CM032074.1 39214409 ~ 39279276 (+)