AMCG00018136


Basic Information

Item Value
gene id AMCG00018136
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2466703 ~ 2476255 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018136
ATGGCGAGTTGCTCCCGATGGCTggccctcctgctgctgctgctgtccctGCTGGGGGGTGGCTCCTCCCAGAACTCCAGCACCCCCCGGGGCTGCGGCCTGGACTTGCCCGCCCGCTACGCTGCGCTGTGTGACCTGGAGGCGGTGTGGGGCATCGTGCTGGAGGCGGTGGCAGGTGCTGGGGCGCTGACCGCCGTGCTGCTGGGCCTGGTGCTGCTCTGCCGCCTGCCCTTCATCGGCGAGAAGGAGAAGCGCAGCTCTGTGGGGCTCCtactgctggtgctgctgggcGCGCTGGGACTCTTCGCCCTGAGCTTCACCTACATCATCCAGCCGGACGAGAGGGTGTGCATCGCCCGCCGCGCACTGTGGGGGGTGCTCTTCGCCCTCTGCTTCTCCTGCCTGCTGGCCCAGGGCTGGCGGCTGCGCAAGCTGGTGCGGCATGGCAAGAGCCCGGGGGGCTGGCAGTTGGCCTGGCTGGCGCTCAGCCTCACATTGGTGCAGGTGATCATCGCCGCTGAGTGGCTGGTGCTGACGGTGGTGAGGGAGGGGAAACCGGCCTGCCAGTACCTGCCTCTGGACTTCACGCTGGCCTCCAGCTACGTGCTGGCCCTGCTGCTGGCCGCGCTGGCCCTGTCCACCTTCTCCCTGTGTGGGAAGTTCCGCAAGTGGAAGCGTAACGGTGTCTGCCTGGTGCTCACCTGCCTGTTGTCGGTGCTGCTGTGGGCCGCCTGGGTCGGCTTCTACCTGTATGGCAACGAGGCCCTGGGCCGCTCCCCGCTGTGGGACGCGCCTGCCCTGGCCGTGGCGCTGGTGTCACACGGCtgggtgctgctgctgttccaCGCCATCCCCGAGGCCCCCCCACACAGCCTGACTACAGTGGCGCCAGATGTCAACACTCTGCGTGCGGGGGGCTACCGCAATGGCAACATGGGTCCACGGCCCAGCGCCCCCTTCCGCAGCAACGTGTACCAGCCCACTGAGATGGCGGTGGTGCTGAATGGGGGCACGATCCCCTCCGCCCCCCCCACCTACACGGGGCGGCACTTGTGGTGAAGACAGGAGTGAGACGAGGGAGAGACCGCTGGTCCCCCCGGGACGGTGGAGGGGTCTGAGGGTGTCATTCTGGATGGGATGGGGGGCTCTGGGACCTGGACTGCACTGTCTGTTACAATGGTGACTGGAGTAGCGTGGCGGGAAGCCCGGCGCCCTGGATGAGCAGCTGCTGCACATCATAACCTGCATTAACACACTGATCCTGCAGTGCATGGACTGGGGGGTTGGGGTCAGGCGTCAGCGGTGGGGGGGTCGTATTCCCAAACTGTTCTGGCACAATGTTGACTTTGCACCAGTCTGGGCTCTGTGTCGGCCAGCTCAAGGTCTGGGAAGAGAAAGAGGGCAGGCGACGTCATCCATCATCTTCTACTGCCAAGGAGTTTGGGTTCCTCTGCTCTGGAGGTCAGGAGGTCTTCAGCGTGTGTGACTTTTGTGAACACCGCTGTCGCCAGAGATTTGTAACTTTGCCCCCAGCGTCGCCCGCCTCCTCTTCTCTGTCAACGCTGAACTACAAATGCTCAAAAACATCTCCCGCACACAAAATCTGAGCCTGGCGTCTCGGGGTAGGTTGTTTGACAAGCGGGTCCTGTCCTGTTGCTCGGATACTTACACTATCGTGGCTGAACTCTGACCCCTCCGGCCACCTGTAGAGTGAGCTGGCTGGGTTTCTGTTTGTCAAAGAGAACTTCAATCTGGTGCAAGATCAGCATCGTGCGCAGTCCCACACAGCTGTCGTCTGGCCGGCTCTGCTCTGTTAGCGGGCGGCCGCTGGTGGCAACACGACAAACCTGACCCAGCTGCTCACCTGACCGGTGTCTTTCTCCTGCTCGGGTCAGAGCCGGCCGGTTCCCATACAGCACCAGCACCCTGTGAATCTCTGAGCCCCCACATCCGCGCCCCTCtgacagagcagagcagagtcAGCGCAGACCCAGTGCGTGTGTGTCCCCACTGGCAGCAGCTCAATGGTGATTGGCCTGGTAgggtttttagttgttttttttcttccctcttgtaaacagaattaataaaaaaaaatgtaatttctttctCCTTCTGGGATGTTCTTCTCTCGCTCAGAGAAGCCCGTTCTGTCACTCTTTCCACACTTATTGTTCTCCCTTTTGAACTTTGACCTCTGATGAACTGTGCCACCGGTCGTTTCTGCCCTAGCCGAACCTCACCGGTTTGGATggaattattttagtttttagtttttttttagttttagtttcttttcttttctttggtgtgcgtgtatatatacgcacatgtatacatatatatattgctgtagTTGTTATTAATCAGTTCAGGCGATCACTGCGCCTCAGAGATGGACAATTCGCTGAGATCCATTTGGTTGTCATAAGGGACACAGGGCTTCCTTGAAACCGCCACAGTGGGGGCCCAGATCAGCCCGTGACGGCGGCACACTGTCGCACTTACACACGGACCGAGCACTTTGAGCAAGTGGGACGGCACTGGTCCAGGGATGCACATCAGACTCAGTGACATGGGACGCTCTCCTCTGTTGAAAGTCATGTTCatatctgtgctgtttttgtttttgatgattATCTGTCTGCCGTGCATGTTccacatctgtgtgtgtgtgagtgtgattcATCAGTGCAGTGCCTCCATAGCTTCTGTGCGTCATATTCCTAATTGCAGATCAGAAACACTCTTAAACTCGCAACCGCAAGCAATTAGGGAAGAACAGAAGATTTTTAAATCCCAGCTCTCTTAACTGGTATCAAGTTGATGTGAAAATTATCAGTGACACAGAGGGGAgcgatttttaaaaattgaaacattCTATGAAATCTTCCAAGAGAGCTGACGTGAAACCCTGAGCCTCTGCTCACCCCTGGCTGACCGAAATCGCAGGCCACAGTGAGACGTGTAGGTCTGGCACATCCCCACCGCCCACACCTTCACACAGCGAGGCAGGCGAGACCCAGAGCTCACAGGGGCCCATGGCGTAACAGCAACCGGAGCAAAACTGAAGCGACCGAGTGCCCTTCCAGCCACTGTGGCTCTGATAAGGGTGGCGAGTCCGGTGAGTGGTGAGCTGGGTCAGGTGACTATTCACACTGTGACCGGCGGGGACTTGTAGGCGACAGCTGGGCCTTGACCCTCGCTCAGCCTTGGCTATTGTTATCTAGGGAAGCTATCCAGTGTCCCGGTGTCGTGGGGGCCGGTGTCACGTGGCTCTTTGATGGCATTAAATGCAGGCTCTAGCGAGGGGTTTTATGTTTCTATTTAAACAACCTCGCCACCGCAGAGCAGAGTTATTTTGACAGTGGCTCGTTGTTAAAGACACGGGCTCAGGAGCTAGACATCTCTGTGCTCAGATGTCATGTCCACTGTCCCGGGTCCCACTCGGACTTGGCCCCCGTTGGCAACCTCTGGAATGAGAGGAGCCGCAACCCAAGCCCCACCGGTCCCCCGCCGTCATCTGAGCAATGCAGACCGTTGGCGTGGGGACCGAGCTCCACTGGGGTCGCGGACTGATTGATATTGGGGCTGAAGCCCATTATCGTCAGATGTGAGGCGGTCAGCGAGGCTCTGGTTTGTGTTGGGCCCTTTAAAGAGCACAGTGCTGTTGGCCAGGTAAGACACGGGACTGAGGGGTCAGTCTTCACTGCTTTGCTTTTTAGCAGTATTAATTGTGTCTCCTGTGCCTCAGGGGCTTGGAGGAGTGTGCTGTGCCAGAGGGGGCTGCACCGCACTGTGTGTGTTGCTCGTGGGACGTAGGGTGAGCTTCCTGGTTGTAACGAGAGGCACTGTGCGTATCGTTGATTTGGGCAGCTTCAGATGATGCCCGGTTATCATACACAATCATGAAACGGAGACGACACTGTAGCAGAACGTTAAGGTCAATAGCTAATCTACAATCGGATACTGTagaaggaatacaaaataatgaacacGCTCTTGCAAACAAGGACGTAAAAAAGATGTGCATTTCCTTCAAAAGTTAGGAAAAATATTAAACCGGTTATAGAACTGAGAGCAAATTCCCACCCCATCATTTGTACTGTACGGAGGCCCTCCTCTCTCACTGGCGTTGTGTGTGCCGGGCCGGTCAGAGAGGCTGTGGCGAAGGAGCAGTTACAGCAGCTGCTACCAAGGAGTGCTTGAAGCGATGAGCGCTTTACTGTCTTAATGAGTAAAGACACagcttttgtttattcttcttctttttcctgaATATAGTCTGATAGCTATTTGATGTGAAtcctgtcagtgcagtgtgacaGTGACTAGGCTGCGGGCCTCTATGCCTCCTGTGATCGGCATCACGCCTGGGTTTCTCACAGACACCTTTCTCTTCAGGTTGTTTCTGAACCGATATGGATGATTCAAACAAAACGGACTCTATTCTGTTCCATCTTCTATTTAGCTGTAGCTGATGTACAAAGTGAAgattgtggggaaaaaaactgtcctatttgttttgttggttttgtgttgttgtttttttttactttagagAAATAAGCCAACACAAATAAAGGTACACTACAGCCTTGCTAAGATACAATCTTCAACTTACTGTCCTTTTAAAGAAGGGAATGACTTGTTTATCGAattaagtttctttttttctggggtttttgtatttaatctaaaGAGCGTTTGATGAGATCACTCTTGGAATGGTCTGGctttttgtgctttgttttttgtattttaattaaatgttgctCAATATGATGAAAGGGAAAACAGTCTCACTGAAAGCCAAGCAGAATAACCTCCAAGCTGAGCAATATACACTTATTCTCTGATCAGGACTGAATTTGCGTTCTCCTTTTGCCACTGTTCTGAATCAAAGCTTTCAGTTTCATGTTTTGCACTTTATGACCGAGAATAATctgatactaataataatcgCTGCTACAAACTATCAAAACCATAATACGCAGAGGGCTACTTTCAGCAGCAGAGGATCTCTTTCTTTCAAAGTTAAAATAACTAACGAACTAACAAAATATCTGttatggagaaaataaacactcatttagagatatctcgaaataCAATGTAAGACATCTTAAACTGAATTCCAGATAGCTCCAACTAACCCCATTTCAAGATCTCAActtcaattagagatatctcaaataaagcaggaaatcatttaaaaatatctcaaactcacttcctgtgaaaatgctgtatgttttgtatggaaGGATCCTGTCTGTTTTAGAGAtctcaaataaaacaggaattcaatttgagatatctcataTTCAATTCAAGGTATCTcgaataggacaggaagtcagttTGAGATATCGTGAATTGAATTTAGAATATCTTGAATATCAGGAAGTTAGTTTGaaatatctgcaattcaatttaagactTGCCCCTCCCGATCGAACACGCCAAGCCACCGCGTTACACCAGAGTCTTTATGGGTTGAGAGCGCTTGTGAGACCAGGTGAAGAGGGTTATTTCGATTACAATCACATcggtgtgttgttgttattgttgtttttttaaagaaatctcaatatattactattattaataatatcttGTGTGGAAAAAgttttgatatgtttttttctataaacactgcaaaaacaaacagacacaaactgacacaaaaAAGCCGCCCCCCATTACAGCAGCTTTGTGTTCAGCCAGAGCTCGGTCCCCCCGGTGCAGGTCTGACAGTCAGCACGCCAGTCCACACACACGCAGGCCAGCATGGTCCAAATAGTGGCCCCTCCTACCCCCCGTGATGTGGGGTCCTGGGAGTGTGTATCAGTTAGGGCGAACCCTGGTCCAGTGAGGCCCAGAAACGACCGTTTGAGATCAATTACTGAAATGATTGCCTGCATGAGGTGGAGCTTGTGAGGGCAAGCAAATCAAAAGGGTCCCTAAGGCAGGagttttattactattattatttatttatttatttattcattctgtgtgtgtgtgtgtgtggggggggggggttaaagcTGCTACTCCTACAATGCACATGTGTGTCACATTAAGACGTCTATATGACCCTGCCCCTCCCCACCacaacacaaattattttaatatgtgttaCAGCTTTCTAAACACACACGGTGTTGTTTCCAatttatacacataaacacGCACACCTGGCCACACAGCCGCAAGCTCTTTCACAGCGGGCATCTTGGCCCATACAACACACTGTGCCATACACCTGAGTACACCCCCTATCTGACACACTGCCATCAATGCAGGAGGGCCAGCACAGAGAACATTGACGGGCCGAGGGGGTCCGGGGGAGAACCTGATCCCCTCAGCATCTATGAATGAACGTTTGGTATCTGACACGGCATGCGTGGGGCCCCCACTGCACTGTAACACCCAACCAGGgaagattttctttaaaaaaaggtcTAGGATTTGCAATGTGCCATTTACAATCCTAATATATCCTaacaacacacactgaacatttcaaatacgaattttgtaatgttgtattCTCTCCCTATCtgtatatatacctatatataaatagagaAAAAGAGAGCTGCACAGCTTGGCATGTTTTTATAtgatccccccaccccccttatCAGGTCAGACTAATCCCTAGCCTCCCCTCCCCACCTCTCTTTGCCGGCGGGACGTCCTGTTAGGGGCTGCTGCCGGGGGGGGGCGGTGGGAGTGGGTGTCTCAGACTGAGATGCCTCTGTATAAACGTGCTATCCCAAATAGAACAGGGTTCCTCTGATTTTGTGTAGTGAAGAAACCATTTACAACAGATGTTCAATAAAATTAATCTTTGTAGTTCAC

Function

GO: NA

KEGG:

id description
K04619 GPRC5B; G protein-coupled receptor family C group 5 member B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018136 True 6873 mRNA 0.51 4 2466703 2476255

Neighbor

gene id symbol gene type direction distance location
AMCG00018134 NA coding downstream 17006 2443707 ~ 2449697 (-)
AMCG00018135 LOC107566046 coding downstream 46668 2411018 ~ 2420035 (-)
AMCG00018137 NA coding downstream 57908 2402298 ~ 2408795 (-)
AMCG00018122 NA coding downstream 246002 2214872 ~ 2220701 (-)
AMCG00018123 NA coding downstream 257140 2203377 ~ 2209563 (-)
AMCG00018140 NA coding upstream 16812 2493067 ~ 2497418 (-)
AMCG00018139 NA coding upstream 39062 2515317 ~ 2517457 (-)
AMCG00018141 NA coding upstream 90036 2566291 ~ 2571948 (-)
AMCG00018143 NA coding upstream 197242 2673497 ~ 2674351 (-)
AMCG00018147 tsc2 coding upstream 275694 2751949 ~ 2783012 (-)
G114456 NA non-coding downstream 90968 2368430 ~ 2375735 (-)
G114363 NA non-coding downstream 482554 1983652 ~ 1984149 (-)
G114304 NA non-coding downstream 588328 1751896 ~ 1878375 (-)
G114286 NA non-coding downstream 931718 1533456 ~ 1534985 (-)
G114273 NA non-coding downstream 953061 1512993 ~ 1513642 (-)
G114554 NA non-coding upstream 192205 2668460 ~ 2668661 (-)
G114658 NA non-coding upstream 519780 2996035 ~ 2998258 (-)
G114681 NA non-coding upstream 600786 3077041 ~ 3077760 (-)
G114720 NA non-coding upstream 663840 3140095 ~ 3141310 (-)
G114739 NA non-coding upstream 924177 3400432 ~ 3401938 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 177841 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 399119 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 460067 1985149 ~ 2006636 (-)
AMCG00018077 NA other downstream 1539964 922278 ~ 926739 (-)
AMCG00018074 NA other downstream 1666232 777387 ~ 800471 (-)
G114549 LOC104962440 other upstream 132890 2609145 ~ 2609479 (-)
AMCG00018142 NA other upstream 160246 2636501 ~ 2647811 (-)
G114838 NA other upstream 1551761 4028016 ~ 4087031 (-)
G115020 NA other upstream 2109807 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 2169892 4646147 ~ 4651641 (-)

Expression


Co-expression Network