G114273


Basic Information

Item Value
gene id G114273
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1512993 ~ 1513642 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143095
ctttattgtgCTCTTATTCATTTCTGATGGATCACGTAGCCCTTGGAATCcatcaaaatgcatttctctcttTGCACTCTCGGCTTCGCTGCACTCAAGGATAAACCCTTGTATCTTTCCCTCGTCGCAGTAGGTTTCCCAGATGGAGACATGGAGACACAAGTGCTACAACACgcaagtacaaaataaaaagcaaaataaaaaaaacagcccaaAACAGTTAAGTTACTTTGTAAAGATATCCATACTTAAAACATACAGGTCATCAAATCTATAGAAGTactataaaaaatatgattcatGTCTTAACATTGAAGAAACCAAAAGAACAAAAGTAGAAATGCTTGTTCCATAATTTTAAGGCtgttgggaaaaacaaaaacaatggttTCTATCATCCACTTTAAGAAATCACTGGATTATACATGAATTACTGGCAGAGGGTCAGTTGAGGGGTAACGAGTGAGTATCGCTGTTAATTATGTTGAATTCGTTAACACAGCTCTGATGGTTCTTTCTAAATTGACATTGTTTAGCGATCATGTGTTGGTGCAGTAtttcagcattaaaataatacgaTGCATCATATAAGAGTAGATGGGTGGCTAGACATGTGAccaaattctctctctctctaactatatatacat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595118

GO:

id name namespace
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0035725 sodium ion transmembrane transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143095 True 650 lncRNA 0.36 1 1512993 1513642

Neighbor

gene id symbol gene type direction distance location
AMCG00018089 NA coding downstream 215059 1295566 ~ 1297934 (-)
AMCG00018090 tmem184a coding downstream 221163 1272583 ~ 1291830 (-)
AMCG00018088 NA coding downstream 264221 1237250 ~ 1248772 (-)
AMCG00018087 ints1 coding downstream 275958 1217293 ~ 1237035 (-)
AMCG00018086 NA coding downstream 304452 1207523 ~ 1208541 (-)
AMCG00018092 NA coding upstream 23325 1536967 ~ 1537730 (-)
AMCG00018094 mad1l1,LOC107722950,LOC107714125 coding upstream 113112 1626754 ~ 1627168 (-)
AMCG00018095 NA coding upstream 126029 1639671 ~ 1663159 (-)
AMCG00018093 NA coding upstream 164192 1677834 ~ 1678345 (-)
AMCG00018100 NA coding upstream 226209 1739851 ~ 1745900 (-)
G114264 NA non-coding downstream 244177 1268293 ~ 1268816 (-)
G114213 NA non-coding downstream 346500 1162890 ~ 1166493 (-)
G114183 NA non-coding downstream 599352 913231 ~ 913641 (-)
G114179 glyr1,LOC107721499,LOC107688117 non-coding downstream 609150 902320 ~ 903843 (-)
G114166 ppl non-coding downstream 623905 879311 ~ 889088 (-)
G114286 NA non-coding upstream 19814 1533456 ~ 1534985 (-)
G114304 NA non-coding upstream 238254 1751896 ~ 1878375 (-)
G114363 NA non-coding upstream 470010 1983652 ~ 1984149 (-)
G114456 NA non-coding upstream 854788 2368430 ~ 2375735 (-)
G114554 NA non-coding upstream 1154818 2668460 ~ 2668661 (-)
AMCG00018077 NA other downstream 586254 922278 ~ 926739 (-)
AMCG00018074 NA other downstream 712522 777387 ~ 800471 (-)
G114021 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 other downstream 1070569 441085 ~ 442424 (-)
AMCG00018113 NA other upstream 471507 1985149 ~ 2006636 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other upstream 493264 2006906 ~ 2067584 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other upstream 768058 2281700 ~ 2288862 (-)
G114549 LOC104962440 other upstream 1095503 2609145 ~ 2609479 (-)
AMCG00018142 NA other upstream 1122859 2636501 ~ 2647811 (-)

Expression


Co-expression Network