G114183


Basic Information

Item Value
gene id G114183
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 913231 ~ 913641 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142981
TAGACAATTATCCGCGGCGTTAATTACCCTCCCATCAAGGGCAGAGCTGCGAAACAACCCGGACGCGTTTTTCAGCATCAAAGCAGCGTCGCAGTGCAAACCGCACGATATTGTCAACACCGAAGCCGCAACCACCGCCCCGGTGGACGTGCTGCTCTCTTACCAAGACGCCCCTCTCCGCCTGGCTGGCCGCAGACATGCTCTCCGCGTCGGGTACCGGGGCCGGGCGCCGGGGCTCAGTCAGTGCCATGGAGGAGCCGCCGCCGCTCGGGTTGTTGATATACTGGAGCGCCGCCCCGCAGGCCACGCCCCCTCGGCGCAGAGGCTCACTGCCGGTGTCTCCCCCTAAAGTGTCCCCCGCCACGGCGCGCCGAACCGGGCCGCAGCTCGCAGGCTTGATCCCGGCTTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142981 True 411 lncRNA 0.66 1 913231 913641

Neighbor

gene id symbol gene type direction distance location
AMCG00018078 NA coding downstream 11563 890097 ~ 901668 (-)
AMCG00018073 si:dkeyp-72e1.9,LOC107601283 coding downstream 72309 802720 ~ 840922 (-)
AMCG00018066 LOC107682913 coding downstream 245320 662249 ~ 667911 (-)
AMCG00018064 NA coding downstream 254723 651287 ~ 658508 (-)
AMCG00018067 NA coding downstream 290986 617211 ~ 622245 (-)
AMCG00018080 rogdi,LOC105899978 coding upstream 2199 915840 ~ 919384 (-)
AMCG00018079 galr2b,LOC107674614,LOC107564701,LOC107753547,LOC108433115,LOC107703387,LOC108257258 coding upstream 58125 971766 ~ 978842 (-)
AMCG00018082 NA coding upstream 88035 1001676 ~ 1012365 (-)
AMCG00018083 NA coding upstream 254024 1167665 ~ 1184993 (-)
AMCG00018085 NA coding upstream 287098 1200739 ~ 1203173 (-)
G114179 glyr1,LOC107721499,LOC107688117 non-coding downstream 9388 902320 ~ 903843 (-)
G114166 ppl non-coding downstream 24143 879311 ~ 889088 (-)
G114044 NA non-coding downstream 413713 498327 ~ 499518 (-)
G114030 NA non-coding downstream 441107 468917 ~ 472124 (-)
G114213 NA non-coding upstream 249249 1162890 ~ 1166493 (-)
G114264 NA non-coding upstream 354652 1268293 ~ 1268816 (-)
G114273 NA non-coding upstream 599352 1512993 ~ 1513642 (-)
G114286 NA non-coding upstream 619815 1533456 ~ 1534985 (-)
G114304 NA non-coding upstream 838255 1751896 ~ 1878375 (-)
AMCG00018074 NA other downstream 112760 777387 ~ 800471 (-)
G114021 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 other downstream 470807 441085 ~ 442424 (-)
AMCG00018077 NA other upstream 8637 922278 ~ 926739 (-)
AMCG00018113 NA other upstream 1071508 1985149 ~ 2006636 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other upstream 1093265 2006906 ~ 2067584 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other upstream 1368059 2281700 ~ 2288862 (-)
G114549 LOC104962440 other upstream 1695504 2609145 ~ 2609479 (-)

Expression


Co-expression Network