AMCG00018285


Basic Information

Item Value
gene id AMCG00018285
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 6759984 ~ 6764079 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018285
ATGACCAGCTGCAGAGCAGTAACATACCTCCTGTTTGTCTTCATCTACCTCCATACACAGCCTGTGTTGGTACAGGTTTCTGCACAGACTGAGCAAAGGAAACCGTTTTTTGAAAGACTGAGGAGACTGGATGAGCAGTTCCGACGCTTCCAGGAGGTGACCCTAATGCGTCTTCAGGGGATTGCGGAGAACTACAACATTTCCTACAACATCGACGCCCGTTTCCAGGTTTTAACCGACCAGTTCCAGAATATCTCTACTGTCCTTAACGAATTCCACACCACGGCATCCAATGACCTCAACAGCTTGAAGTTCTGGACCAAGAAGTTGCAGAAGAAATCCAAAAAGCTGGACTTGAAGGTGACGGCGTTGGAGGAGACCTTGAATGTGAAAGACAAGCAGGCTTTGAGGGAGAATAAGGAGCAGAGGTCGCTGCTGGCCAACCTGACCCAGCAGCTCCAAGAGCAGAGAAACCAGATCAGCTCTCTCGTTGCCGACAGAGACATGGTACAGGGCAGTCTGAAAGATCTCCAGGATGGAATCAAAAGCCAGGAAGGAAAGATGGTCCAGTTTGAGGCACAGGTTAGAAATGCACTGCAAAACGATGCTCTAACCAGTAGATCAGCTCACCATTCCCTTAACCAGACACCCCAAGATCCAACTCCCAGACAGCAGGATCCAACGAGGGAGCAAGAGCAGAGGAGCCCCCAGACCAGCACCAAGCTCCAGCCGAAGCACTCCAAGAACAAGAAGGTGCGAGACAGGCTGCAGCTTCCCAGACCAACGCAGCCCCTGGCACCACTGCAACCATTACTGCCTCACCCCCAGCCACAAGCAGTGCCTCAGCTACAGTCCCAGCCACAAGAAGTGCCTCAGCTACAGCCCCAGCCACAAGCAGTGCCTCAGCTACAGCCCCAGCCACAAGAAGTGCCTCAGCTAGAGCTACAGCCCCAGCCACAAGCAGTGCCTCAGCTACAGCCCCAGCCACAAGCAGTGCCTCAGCTACAGCCCCAGCTCAAGTCAGAGCCACAGTTTGAGCCAGATCCCCAGCCCCTTGAAGAATCAGAGGTCCAGCAAATGCAGGACCTGCCTGAACTCCCTCTGAGGCACAAGATCCCTCGACAACAGCAAAACTATGTCACCTTCAGGAAGGGGTTTCTTGCGAGAATCCACGAGCTGTCCATTTGCTCTTGGCTGCAGGTCGATGTTCCTTATATGGGCACCCTACTGTCCTACGCCACGGAGGAGAACGACAACAAGCTGGTCCTGTACGGCAGGAACTCCAGTGAGCAGGGCAGCGTGGACTTTGTTATCGGGGACCCGGCCTACCGCCAGCTACCTGTCAAGACCCTGCTGGACGGCAAATGGCACCACTTGTGCATCATCTGGTCCTCCATCGAGGGCAAGTTCTGGCACTACACGGACCGCCGTCTCACCTCCACCGGATCCAAGTTCCAGAAGGGTTATGAGGTTCCATCTGGGGGGTCTTTCATCATGGGGCAGGAGCAGGACTCCCTAGGGGGGGGGTTCGATGTTGCAGAGGCCTTTGTGGGCCAAGTGGCGGGGTTCGCCGTATGGAATCGGGCTCTGGCACCCGGTGAGGTGTCAGGGATTGCCATGGGCAAGGGTCTGCCCAGGGGGACTATCTTGACCATGGATGACATCGCTGCCGTTCATGGGGCCGTACAGCAAGTGGACTGTGACTGCCTTGAGCACTGCTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018285 True 1725 mRNA 0.55 3 6759984 6764079

Neighbor

gene id symbol gene type direction distance location
AMCG00018288 clcn7,LOC106594444 coding downstream 5342 6737585 ~ 6754642 (-)
AMCG00018287 NA coding downstream 30603 6716884 ~ 6729381 (-)
AMCG00018284 arhgdib,LOC108432841,LOC107590585,LOC107685923,LOC107568023,LOC106601960 coding downstream 84777 6653889 ~ 6675207 (-)
AMCG00018283 c2h16orf72,zgc:77849,LOC105900007,LOC107590581,LOC107738628,LOC107685917 coding downstream 166882 6584976 ~ 6593102 (-)
AMCG00018293 grin2a,LOC107685916,LOC107690256,LOC107568390 coding downstream 295127 6309369 ~ 6464857 (-)
AMCG00018290 NA coding upstream 12258 6776337 ~ 6777438 (-)
AMCG00018298 NA coding upstream 16692 6780771 ~ 6783583 (-)
AMCG00018299 NA coding upstream 57516 6821595 ~ 6826223 (-)
AMCG00018301 NA coding upstream 63540 6827619 ~ 6850794 (-)
AMCG00018304 NA coding upstream 102833 6866912 ~ 6876178 (-)
G115395 NA non-coding downstream 540768 6217528 ~ 6219216 (-)
G115332 LOC100136012 non-coding downstream 713366 6046030 ~ 6046618 (-)
G115279 NA non-coding downstream 1005962 5750092 ~ 5754022 (-)
G115278 NA non-coding downstream 1009941 5749783 ~ 5750043 (-)
G115277 NA non-coding downstream 1011625 5747458 ~ 5748359 (-)
G115534 NA non-coding upstream 237723 7001802 ~ 7002005 (-)
G115577 NA non-coding upstream 970018 7734097 ~ 7734384 (-)
G115579 NA non-coding upstream 977895 7741974 ~ 7742210 (-)
G115580 NA non-coding upstream 978462 7742541 ~ 7742747 (-)
G115596 NA non-coding upstream 1078258 7842337 ~ 7842708 (-)
AMCG00018291 NA other downstream 107211 6610633 ~ 6652773 (-)
G115320 NA other downstream 808929 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 1393230 5356846 ~ 5366754 (-)
G115183 NA other downstream 1455555 5300107 ~ 5304429 (-)
G115174 NA other downstream 1472111 5286386 ~ 5287873 (-)
G115581 NA other upstream 979139 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 1877817 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 1902658 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 2475733 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 3010227 9774306 ~ 9779545 (-)

Expression


Co-expression Network