AMCG00018467


Basic Information

Item Value
gene id AMCG00018467
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 11619373 ~ 11638050 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018467
CTTtctccaaaaatgtaaatagcttTTCTTACTTGCATTGCATTCTTtcaatcactttattttttcctcttttttgctttctttctccctAACTCATAATTGGAAACCCATTGGCCCGGCGACAACTCTATCTCAAATGTAGAGTCTTTATCAGCCCTTTTTCCTGACCGTGTCGAGACCTGATTTTGCTGTTGTCCTTCTAACAGATAGCCTGATGCAAAGCTGGTAGGCAGTTCTGCGTGTGATtaggggggtggggttggggggagaTTAATGTAGCTCtctatttttctttcccagAACCTTATCAGTGccactatgtgtgtgtgtgcgtgtgcgtgtgtgtgcatagtGCATTTCCACGTGTCTATGTCCATGCCAGTCTAAATTACGCTCCCCTTCCTGACGAGATGTCTGCGACCGAGTCCAAGATAGAACTATGCAACATGTCCACTGTTTCCATCGCTGAACCAGATAAGGAGAAAGTTAGCTTCCACCTGAAGCCCAACTGGTATGAGAAGTATGCCCAGCCCTGCATTGCTGAGCTCCTGGGATCAGCGCTGTTCATCTTCGTGGGCTGCTCCTCGGTCATCGAGAATGTGGAGAGCACGGGGAGGCTGCAGCCCGCTTTGGCCCATGGTTTGGCGCTGGCCATCGTCATCGCTGTCCTGGGGGAAATCAGtgggGGGCACTTCAACCCAGCagtgtccctgtctgtctacctgATCGGGGGTCTCAACATAATCCTGCTGCTGCCCTACATGGTGGCCCAGTGCTGTGGCGGGCTGCTCGGAGCTGGTCTGGCTATGgCTATCTCAACACCAGTGAGTTATGACAACGCCACGGGCGGTGCTTTCAATGTGGTCAAGAGCAACGAGCAGATTTACGCGGCCATCATTGCAGAGATAGTGATGACTCTGTTCCTGACCATGGTGGTGTGCATGGGCGCCGTCAATGGAAAGAGCCGCAGCCCCCTGGCCCCCCTGTGTATCGGCCTGACTGTGGCCGCCGACATCCTGGCAGGAGGGGCTGCGTCCGGTGCCTGTATGAACCCTGCCCGTGCATTTGGGCCAGCTGTTGTGGCAAACTACTGGGACTACCACTGGATCTACTGGGTGGGGCCCATGGCTGGGGCCCTGTTCACTGCCTTCTTCATAAGACTGCTGTTGGGTGACAAGGACAAGCATGAACTCCGCAACTTGGAGACCACCTTCCTGGAGCATGCCGAGAAGCCCACCAGGACCCCCAACACCTTCGAAAGGCTTGTCCAGCCCTGTGCGGCTGAGCTGGTGGGCACCATGTTCTTCGTGTTCATTGGCTGTGTGTCGGTCATCGAGAACGTGGAAGCTGCCGGGCGCCTTCAGCCTGCGCTGGTGCACGGCTTGGCAGTGGCCATTATGGTGGCCATCATGGACAACATCAGTGGCTCCCACTTCAACCCCCCGTTCACTATTGCCATCTTCTTGGTGGGGGGCATGAAATTCATCATGGTTGTCCCCTACCTGGTCTGCCAGGTGATTGGAGGAGTGCTTGGAGCAGCAATGTCAAAGGCCATGACATCAAAGGAGCACTACTTTAACGCTACAGGAGCAGCCTTCACCATTCTGAAATCAAATGACCAGCTAGCAGGGGCTATTTTCGGGGAGGTGGCAATGACATGCCTGGTCACAATGGTGGTGCTGTTGGCAGCAGTCAACAAGAGGAGCAAGACTCCCCTGGCACCGTTCCTGGTGGGCTGCACGGTCATCATAAACGTCTTGGCTGGGGGCGACGTGTCCGGTACCTGTCTGAACCCGGCCAGAGCCTTTGGCCCCGCTGTGCTCACCAGTTACTGGACGTATCACTGGGTATACTGGGTGGGCCCGATAGGGGGCTGCCTGGTTGCAGCAGCACTGGTCAGACTGCTGCTGGGAGATGAGAAGATCCGTCTTATCATGAAA

Function

GO: NA

KEGG:

id description
K09869 AQP8; aquaporin-8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018467 True 1940 mRNA 0.55 10 11619373 11638050

Neighbor

gene id symbol gene type direction distance location
AMCG00018468 NA coding upstream 13021 11595921 ~ 11606352 (+)
AMCG00018464 NA coding upstream 92578 11515955 ~ 11526795 (+)
AMCG00018462 grid2ip,LOC108274076,LOC108432200,LOC106589205 coding upstream 105031 11488147 ~ 11514342 (+)
AMCG00018465 NA coding upstream 166899 11450500 ~ 11452474 (+)
AMCG00018463 e4f1,LOC107758096 coding upstream 183173 11427683 ~ 11436200 (+)
AMCG00018470 NA coding downstream 39712 11677762 ~ 11678127 (+)
AMCG00018469 prkcb,LOC107722959,LOC105899995 coding downstream 117784 11755834 ~ 11817048 (+)
AMCG00018471 cacng3b,LOC107710002,LOC107590403,LOC107689612,LOC107719973,LOC107688095 coding downstream 217470 11855520 ~ 11900247 (+)
AMCG00018476 NA coding downstream 318179 11956229 ~ 11966330 (+)
AMCG00018475 NA coding downstream 329839 11967889 ~ 11987054 (+)
G116479 NA non-coding upstream 203635 11415481 ~ 11415738 (+)
G116477 NA non-coding upstream 207303 11410805 ~ 11412070 (+)
G116374 NA non-coding upstream 535584 11061569 ~ 11083789 (+)
G116358 NA non-coding upstream 639688 10977022 ~ 10979685 (+)
G116354 NA non-coding upstream 880198 10738286 ~ 10739175 (+)
G116546 NA non-coding downstream 90759 11728809 ~ 11818089 (+)
G116601 NA non-coding downstream 488400 12126450 ~ 12126699 (+)
G116603 NA non-coding downstream 500952 12139002 ~ 12142135 (+)
G116653 NA non-coding downstream 634539 12272589 ~ 12273496 (+)
G116654 NA non-coding downstream 640380 12278430 ~ 12278840 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other upstream 363208 11252359 ~ 11256165 (+)
AMCG00018422 NA other upstream 1327112 10257805 ~ 10292261 (+)
AMCG00018406 NA other upstream 1572850 10044452 ~ 10046523 (+)
AMCG00018405 NA other upstream 1606700 10004273 ~ 10012673 (+)
AMCG00018380 NA other upstream 2006455 9606661 ~ 9612918 (+)
G116585 rbbp6,LOC107689611 other downstream 328197 11966247 ~ 11970778 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other downstream 851417 12489467 ~ 12500054 (+)
AMCG00018491 slc5a10 other downstream 864973 12503023 ~ 12520331 (+)
AMCG00018498 NA other downstream 905495 12543545 ~ 12611879 (+)
G116832 NA other downstream 1615293 13253343 ~ 13255794 (+)

Expression


Co-expression Network