G119005


Basic Information

Item Value
gene id G119005
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22558213 ~ 22558419 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149154
ATGGGACCGGTCTTTATTTCCATAAACTGCCATAAAAAGTACTTGTGAACACCTTTCCTATTACCTGTAACACACTCGCCCCACACACCCTCCCACTCAGTTCTGGACTACGTGACGTGGCATTTTggagttaatttaatttaaatgcactCCTCACACATAAGAGGTGCCCCAGGATATGTAACCATATTGTTAAATCCCTTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149154 True 207 lncRNA 0.43 1 22558213 22558419

Neighbor

gene id symbol gene type direction distance location
AMCG00018832 crkl,LOC106566436,LOC106563168 coding upstream 97796 22455239 ~ 22460417 (+)
AMCG00018833 NA coding upstream 108884 22440803 ~ 22449329 (+)
AMCG00018834 NA coding upstream 135399 22401501 ~ 22422814 (+)
AMCG00018827 NA coding upstream 419920 22115610 ~ 22138293 (+)
AMCG00018829 NA coding upstream 466595 22091346 ~ 22091618 (+)
AMCG00018836 NA coding downstream 45932 22604351 ~ 22627498 (+)
AMCG00018838 derl3,derl2,LOC107667536,LOC107602852,LOC105014174 coding downstream 72126 22630545 ~ 22636051 (+)
AMCG00018837 NA coding downstream 92720 22651139 ~ 22659793 (+)
AMCG00018847 NA coding downstream 126458 22684877 ~ 22692816 (+)
AMCG00018845 NA coding downstream 153273 22711692 ~ 22719425 (+)
G118999 NA non-coding upstream 10522 22547272 ~ 22547691 (+)
G118885 NA non-coding upstream 876490 21681320 ~ 21681723 (+)
G118863 NA non-coding upstream 1135443 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 1626809 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 1937666 20607648 ~ 20620547 (+)
G119006 NA non-coding downstream 2643 22561062 ~ 22561280 (+)
G119007 NA non-coding downstream 4133 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 5951 22564370 ~ 22564707 (+)
G119009 cabin1 non-coding downstream 6939 22565358 ~ 22565611 (+)
G119010 NA non-coding downstream 9347 22567766 ~ 22567980 (+)
AMCG00018820 NA other upstream 660513 21848370 ~ 21897700 (+)
G118815 NA other upstream 1368967 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 1785627 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 1863019 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1954898 20601956 ~ 20603315 (+)
G119507 NA other downstream 2675663 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 2907672 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3120258 25678677 ~ 25718426 (+)
G119762 NA other downstream 3902201 26460620 ~ 26461227 (+)

Expression


Co-expression Network