AMCG00019336


Basic Information

Item Value
gene id AMCG00019336
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15240522 ~ 15255397 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019336
GCTTTAAGGCAGCAACATAAACGCCGGAATGGTGTGTCAATGATGGTGAACAAGGCTGTCCCTCGCGTTGTGCTGACTCCTTTGAAGGTCTCTGATGAGCAGCCCGATTCTCCATCAGgcCATATCAAGTGGACAAAGGCTGAAGATATTGACATCGAAACTCCAGGGTCTATATTAGTGAATACAAATCTGCGAGCATTGatcaacaaacacacatttgcatCCTTACCTCAGCACTTTCAACAATACCTCCTGCTTTTACTGCCAGAGGTGGACAGACAGatgggAAGTGATGGAGTTCTGCGTCTCAGTAATTCAGCTCTGAATAATGAGTTCTTTGCTTATGCTGCTCAGGGTTGGAAACAGAGGCTAGCAGAAGGAGAATTTACCCCAGAAATGCAACTGAGGATAAGacaagaaatggaaaaagaaaagaagatagAGCTGTGGAAAGAGAAATTTTATGAATCATATTATGGAGAAAAattggGCATGACAGAAGAAGAATCGATGGTCCTTACTACGGTGCAGAAGTCTACCAAAGACAGTTCCAGTTCAGCAGTGGAAGCTTCTGCTTCCCCAGGAACGTCTGCTCAATGTCCCGCAAAGAATAAAGAACCTGAAGTTACTGAgaaattgtttgtgtgtgaggaaGATGTGGATCAGACAGTGTGTAACATGGAGCTAGCTTCTAAAGCTTCTGGACAGCCGCCAGAGGATATTCTGCTATCTAGTTTCCCTGATATTTCCACAGAAGAATCGGTGGTGCAAGAGGAGATTGCAGAGGAAGTGGATCCCACTGCTTGCGAGTACCTGGAGGAGCAGGTTAAACCAGGGACAGAGACCTCAGAGTACATCAGTAGCTGCACCCCGAAAAATGAGGAAGAAGAAACGGCAACTTTGCATTCAGAGAACGCAAATGTCCTCACAGAATACCCCCCCTCAGGGACCTCCGTTCAACCCGCACAGGAAATCAATCATAAACCAGCAAGTAATGAAGCAGAAACCCTAAATGCAACCCCACAGTTAGCTCAAAATTCATTGGACCAAACTCTGTCCCCTCCTGTAGATTTGGGAAATGACAGCAATGAGACGATGCCTCCAGCTAAAGAGGAGTTGTCCTCAGAAGAGCAGCACTTGCAAACTGAGCAGACCGCCCTCATGGTGACAGTGGAGCAATCCCTGCTTTCCAAAAGTGATTCTGAAGTGGACCTTTCAAGCCCAGAAGAACACAGTTTGAAGGACCAATGCAACTTAGAACAGCTTGCATCAGCGGACGACACAGAGAGCCAGTTGCAGGTCAGCACACAGCCAGAAGAAAACGATCAGAAGACTCAAAAAGAGATTCTGACTTGTTCTCCATCAGACACAATAGCAGTCCCGAAGGAAGAGCCCATTGGGAATCGAGAGCTAAAACCTCCCAAAGAAGTAGAGGAATGTGAAACTGACAGTATTAAATCTGAACTGGACACAAATTCGCTTGTACCAGCTGAAACCTGTGCCTCTCCCGCAGCTGAAAAACCAATAGTGCAAAGGGCTCCGAACAAAAGGCttgaaaatactgaaattaaaccGAAGCATTCCCCAGAGAAGTTGGACTCAAAAGCAGCTCCACTCTTAGAAGGCATCTTTGAGCCTGTGTTAGAACCTGAAGAGCAGAAACCGGCCCAGCTTCTACCTGAAACAATATCAGCTGCCCCAGAAGTGGAAGACTCCACATTACCAGAGGTGTCTCCCAGTGAAAATACCCAGCCTAAACCGATCACAAAAGAGCCCAAAGAGGAGAGTGATATCTTTCCAGTAGAGAAAACCTTGACAGAGACTCATAATAATGCCAAAAGTTCAAAGCAGCCTAAATATCACCAGATTGCTGAAAAGTCTTCTGCTTTAGAAATCACTTCATGGGCAGAAATGCTAAAGGCCAAGCACCATAAACCCCACCAAACGAATCACCATCACAGGGGAGATGAACCACACTCCCTAAAGCAGATGGAGCCAAGCAAGTCTCCAGAACTGTTCCGCACAGACAACCGGGATATTGAGAACCCTAAAAGGAAGACAGGTGAGCAGTATACGGGGATCTGCAAGGAGAAGAGGGCCAGGATGGAGGAGAATGAGTCTCTCAGCTCTGGACACTCCAGTGCCCAGTCTCGTGAGCGAGAGTCTCTGCCAAAGGAGGAGCTCAGAGTCCCACCACTCAAGaTTCAACTGTCCAAAGTTGGTCTGCCATTCATTATCAAGACACAGCCAGTGTCAAAACCTGAACCTAAGGTTTCTTCTACTGCTTCTCAAAGTGCAGGAAGGAACACTGGAGCCAGAACTTTGGCAGATATCAAGGCCAGGGCTCAGCAAGCCAGAGCTCAAAGGGAGGCAGCGGCGGCCGCAGCTGTGGCTGCAGCTGCACGGATAACATCTGTAGAAGGTGGAACCCCATCTGAAGGGAGCAAGACTAGGACACTTGCCCATATCAAAGAACAAACTAAGGCAAAACTCTTTGCAAAACACCAAGCCAGAGCTCATTCCCATCAAGTTGTAAAGGGTCCAAAGCTACACAGTACAAAGGAGGATAGGTGTTCTACAGATTCTCAAACTGCTGTTCATTCAAAAAGTGACTGTCCAACTGGTGTTATTATGGCCAATCCCAACAGGAAGTCACCTGAAAAGGCCTTTGCCCTTGCCCAAGGATCTTGTCCTACCTTGAAGACTTTTGAGAACAGAATTGCAGTTGCAAAATCTGTTGTCAGTATATCTGTGCCAAACTCTGTTCCTCGCAGTATTCCAATACCCCACCCTTCCAGTACCATGTCTCAGCCCAGAATTACAAACACAAGTTCAGGAGATGGcaagacaaacacaaatccTGTTTGTAACCCACCAGTATCAGCCTACGGCTTTACCAGTCCCCCTCAGAGCCCCTCAGTTCTGGTGTCTGTCAGCAGCCCTAACATCCAGAAATCGTTTTTCAAAGTATCCACATCTAAACCCTGTGCCAAAACTACTGTCTCTAGCTCATCCCATAGAGCTGTCTTGCCAAAGTACAGTGATGGACTTTCTGCTCCCAATCCCGCTGAAGCAACATGCTCTTTGACTAACACAGCCACCTGTCGCTCTGCAAGTTATGTTGGCCTGAGGTACACTGGTCATATCACTTCCACTGCCTCATCTTTCAGCAGTGAGAAGCTCAACTCCAGTGTTCATAGCATCCAAGACAGTGCAGATATTTCCCAGAGAACATACCCCCCAAGAAGCAGCACACCTTTCTCTTTTGATAGGAAATGCATGTCCTTAGCCTCTGATCATCATGCCTACAGCAGTTCAGAGAGAAGGGAAACTCAACATTACAGAGACAAAGTAGCAACTGGCTCTATTAAAGGTCAACCCCATGTTGACAGGGCTCCAGATAATATAATTTGTGCACCGAATTCAAAGAATactgtgaatgaaaatgaaaccatgAGGTGTAGACCGCTACTTCCAGCAGATTCAGCCAGTAACAAAGCTATTCCATGTAAAGTTATAGTGGATCACTGTTCTGCTTCATATTCAAGCATGCCCTCTTCAGCAATGCCTGAAGTTCGGCGCAGTCTACCAAACAAAGGTGTTAAAACAGAAACGGTTCTCCGGCTACAGGAGTCCATAATGAGTCGAGCCGAACCCTTCCGCCAAAAACAAGATCAGAACGCTATCTTCAGCACTGCCTCCAGACTGAACAATAAAAAACTGCAGATGGCTTACAATGTCTTGCATGGTCTGCCTGTATCCCAGCAGGATGGACGAAGGGACGGTGATCTTACTGAGCAAAGTGCAGCCAATCTCATATACAGCTCCTTGCTGTACAAACATGCTGAAAAGGCTGTAATCAATGAGCAAGGCAATGAACCTAAAACCTGGAAAAAGGAGAAAGACAAGCACAGTATGGATACATTGGTAATCCATAAACATCACCATGTGCGACAAAGCAAAGTGGAAACTACTTCAGGCCCAGACAGAATGATCACTTCTCCAGACTCCTCTCATTTTTCAGAAACCAGAGTCATCAAATCTGAACCTAGTGATATGGACACCGGTGATTTCAAAGAACCCATGAATCCACATGCAGCCGCTCACGTACTGCTCAAAACCTCCACTGCAGCTGTGTCTTCTCTAGCTGAGGGCAGTGTGTCATTGAACATGGAAAACCAGAGGAGAGTTCCCCTTGCTGGAAGCTCAAGTTGTCGTCTGTCGTCAGTGGAGGCCAATAACCCTCTAGTAACCCAGCTACTGCAGGGCAACCTGCCCCTGGAGAAAGTGCTACCCCAACCACGGTCAGGAACTCGGCTAGAGATAAATCGACTACCCTTGCCTTTCCAGAATACCTCAGTATGCAAAGCAGCTGTTGCCGAGAGAAATGTCATGGAAAACCCTCAGAGCTGCCTCAGCCCAGATGGCAAAGGACACGTTTCAGGACTAGCAGAGCCTGGCCACATCAGAAAGCAGGACATCCATGCAAATAGAAGAGTGGCCAGGCCTCTGGGGGAGCTGGCTCACATCAAGAGTGAGCAGGGCAAGACAGAATCTAAAATTGCTTCCTGCCACCTTAGTGCTCATATAAACCAGGTGGGCCCAGGGCAGCCGTTTGTACAGGAGTGGATGAACAAAAACCTGGTACATGGCAGAATTACTCCCAGTGCAGAAATTAAACAACCAAAGAGGACTCTCCCTGCTTGTAGCTTTCAAAAAGGGTTATTGGGTATTGATAAAAATGGCAGCTATTCTTCTGAAGCCAGTGCCTCTCAAAGGCTTTTCTATCCTCCCCCAGCTGATGTCAGAGACTCTAGCCCTCCAACTGCTTTGCTTCAAGCCAGCATTAAAGCCACATCTGGCTGCAGCACTCCAAACACATTAGCATTCAACAGAAATCAGGAACAAAAAGGTCTAGGAGAGGTCAATATTTCTGTGGCAACAGATCAATTGAGAAAAGGAAGTGTTTTTCCACCTAATCTTCAAATTAAGCAGGCTGATGACATTGGCAGTGTCTCACAGGCTGCCCAGAACAAATCTTTAGTCCATCCACCTAATGGAGAAGTCCCATCTGATCAAAAGCAAACAGTTGTTGCCATGGAGACCAACAAGGGTCTCAATTGGCTTCCCTCGGCAAACATCTGTAGCAATATAAAAGTAGAGCCCATTTCTTTTGACGAGGGGTTAGGCAACAACTGTGAAATGAGTATTAAACAGACATCTTACGAGCAAAATGAAGGAAAAGATCATGTGCaggtttttcaaatgaaaagccCAGAGTTTCCACCCTACATGGCCCCTGAGCCACAAAAGGGTTTCGCACAGTTAAACCCTCCAAAAAATCCACATGTACCTCAGCCTCAGCAGGTGTATGGTAACTACTCGACAATACATTTCAACAACACTAAGTTCAACAGAACCGCATCTGTTATCGAAAAGTCCATTGGAAACTTTCTGGGCAACAGTACAAGTGGGGCCAGTGGCTTGTCTAATCAGAGCGCTCCTGTTTCAGGTCAGAAATTTGCTGACGGCAGCAATGCAGATGAACTGGAGCTAAAATGCTCATGTCGGCTGAAAGCCATGATTGTGTGTAAAGGCTGTGGAGCCTTCTGCCATGATGACTGCATAGGCCCATCAAAGCTATGTGTTGCCTGCTTAGTAGTTCGGTAGCCAGTGATTTAAAACTTGTGAACACTAAATTGTATATACTTTTGGATTTAGTTTCATTCCTGCaccatttaaagtatttaaaaatacatttttaacttatttcttttttttaagctttgtgtCTACTTCATAGCAACACTGTAAGTATTTCAATGTTTACATGAAAACAGAGGAATGTGAATAAGCTATCCTATGAAACCGAATCATTGAATTTGAAGTATAGCACTGTCTGAAAACGTGTGGGATAGAAGAAAAAGCCATTAAAATATGCACTACAACTCACTTACAAATTAGCATGGCCTGAACTGTAAAATGTGCctgtaatttgaaaaacattatgGACTTTTTATATGTTAATCAAGTTTCACCATCATACATTTCTTTGAGACCTGGAATTTAGTAATTACGACTAAAAACATCCACATGAGGATACTGCACAAAACATTAGGCAAAGACATCTCTTAAGATATTTCTGACGTACATGCACACGGAACAAAAAGCAAAGTGGGTTCTTTTTTGGTCATTCTTCTTTCAATGTGAAGCATCTGAGTGATTTgaatttgtgttgatttttttttttttcacagagcAGCTGCAGTAATACAGATCAAACAGTATGTTGATCAGGccttataaaatgttttgtctttattttctcattctttCTTCCAGCCCATAATGTCTCTGTTGTACTGTGGTGAATCACTGTACACGTAATttgtaacttatttatttattatgacatACATGTAAACTGTAAGATTCTATGATTTGTATCAGTTATATGATTGCAAGTTgtgaaatgtttgctttttttgaaTACAGAATTATTCTGTAGTGGAACAGTTACATTTGTATCCATTCCACACCTAAGCTGTAAAGAATGGGAGCCCATTCTATCAAAGTATTCATTAATAAACATCAGGGCTTGTGCTGTGCCAATAATTATCTGATACTGTCTTACCTGGTATCATCACCAGTACTGAAGCTtgtctttaaaagaaaagtactTCTGCATAACCAAGCAATGTGTTACTTGACTTTCCCTCTGAAATATTTATGGGCAGACAGTATTCAATTAGATACTTGTTTGGTATAAAATGTACCTGTAATATACATGTAAccttaatgtattattaattaagtaCATCTTACCTTTTTACCACTGCTGATTTAAAACTGtgtcaattacattttgattttgttttctgttaacaG

Function

GO: NA

KEGG:

id description
K11471 ASXL; additional sex combs-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019336 True 6888 mRNA 0.44 7 15240522 15255397

Neighbor

gene id symbol gene type direction distance location
AMCG00019337 NA coding upstream 11746 15219221 ~ 15228776 (+)
AMCG00019323 NA coding upstream 295295 14938940 ~ 14945227 (+)
AMCG00019324 NA coding upstream 312551 14914025 ~ 14927971 (+)
AMCG00019331 NA coding upstream 333044 14903342 ~ 14907478 (+)
AMCG00019325 NA coding upstream 338676 14896825 ~ 14901846 (+)
AMCG00019342 NA coding downstream 180918 15436315 ~ 15479736 (+)
AMCG00019347 mapre2 coding downstream 265029 15520426 ~ 15529911 (+)
AMCG00019344 NA coding downstream 311258 15566655 ~ 15581014 (+)
AMCG00019346 mcm4,LOC106569128 coding downstream 426507 15681904 ~ 15688849 (+)
AMCG00019350 ub2v2,ube2v2 coding downstream 437645 15693042 ~ 15705080 (+)
G33161 NA non-coding upstream 748316 14491892 ~ 14492206 (+)
G33153 NA non-coding upstream 954506 14285565 ~ 14286016 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding upstream 1079819 14152802 ~ 14160703 (+)
G33093 NA non-coding upstream 1602351 13633702 ~ 13638171 (+)
G33075 LOC104962440 non-coding upstream 1928780 13311414 ~ 13311742 (+)
G33307 NA non-coding downstream 228681 15484078 ~ 15533196 (+)
G33392 NA non-coding downstream 673172 15928569 ~ 15931201 (+)
G33404 NA non-coding downstream 747399 16002796 ~ 16003201 (+)
G33408 NA non-coding downstream 845561 16100958 ~ 16101159 (+)
G33422 NA non-coding downstream 1110717 16366114 ~ 16366342 (+)
G33283 NA other upstream 70681 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 753816 14439253 ~ 14486706 (+)
G32539 NA other upstream 4831025 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 5611860 9369898 ~ 9628662 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 5891703 9329479 ~ 9348819 (+)
AMCG00019345 NA other downstream 299422 15554819 ~ 15626955 (+)
G33406 NA other downstream 788545 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 2193923 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 3749627 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 4030139 19285536 ~ 19294208 (+)

Expression


Co-expression Network