G33307


Basic Information

Item Value
gene id G33307
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15484078 ~ 15533196 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41737
tttttgttttgtttgtttttttcctcttctcctgAAGACCGAGCACATAGGCAGCCTCTAAAAGGACGGTAACTTTAGTCCCCACATTAAACATTCACTCGCTATTGTGACTGTCGGTGACATGCGGCGTTCAGTTCTCATCATTTCATCGAGAGGCAGCGGCCAGCCCGGGGCGAAGCGCGCTGCGTGTCTGTGTCCAGGGCTGTCCAGCGCCGCTCCACTGCGGAGAAGATGTGTTCAGAGCTCAGGTATGGGGACGTGTTGAGTTCAGGACCGGTAGTTTGTAAACATTACCAGCTTCTTTGCCATCCATTGCTGTATgctatttttatgatttttattttattttacatatcagTTTATTAATTATGATGAAACGCAATAAGCCTAGCCCTGAAAGGCTAATATTAGCTATTTTATGTCTCCCTTAATACTGCCACTAAGACATTTGTTGACTGTAAACAGAATTGTCATAGTTTTAGTAAATGCATTCCCATCCTGAATCATGTGCATCATGAGAAGTGACATTTGTTTTGCCAGAAGGGTCAGAAATGTGCTGATGAAATCGAATGTCTGAATCAGTTTTAGGAGATCcactttttatttgtactcTGTAATCACATGTCCGGGGGAAGAACTGCAGTCATATGTGAGAGACACTTCTGTCaatgttttgtctgtttatttaaccACAGGTCCAGAGAAGTCACGTCATTATCGAGTTCACTGACACCATACAGTATTCCAGGAAATCGTCTTCTGTTCATTTTGATTTTCCTAAATATGCATTTGTCATTACGTTAAGTCAATAGCTCACCATCATGCTTTGGTTCTATATTACATGTAAACTGAAAaggaatgtaaacaaatgtactgTTTATAGTTATACatagcaaaaaagaaaaaagtattcgGGGAGTCATTAGATGCAAGAAATGTCTTAAGATGTATCTCACTCATTTTATGTTATCCACAATTTGTTGCATGGTAGAATtggtagacttttttttttttgtctttgattaTGTGAATAACTTGACCTGCTTTTatctttttacatatttaataaaaaactatATGTTAAGTGATCTGTGTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41737 True 1098 lncRNA 0.38 2 15484078 15533196

Neighbor

gene id symbol gene type direction distance location
AMCG00019342 NA coding upstream 4342 15436315 ~ 15479736 (+)
AMCG00019336 NA coding upstream 228681 15240522 ~ 15255397 (+)
AMCG00019337 NA coding upstream 255302 15219221 ~ 15228776 (+)
AMCG00019323 NA coding upstream 538851 14938940 ~ 14945227 (+)
AMCG00019324 NA coding upstream 556107 14914025 ~ 14927971 (+)
AMCG00019344 NA coding downstream 33459 15566655 ~ 15581014 (+)
AMCG00019346 mcm4,LOC106569128 coding downstream 148708 15681904 ~ 15688849 (+)
AMCG00019350 ub2v2,ube2v2 coding downstream 159846 15693042 ~ 15705080 (+)
AMCG00019353 NA coding downstream 396679 15929875 ~ 16130440 (+)
AMCG00019354 sntg1 coding downstream 707186 16240382 ~ 16266099 (+)
G33161 NA non-coding upstream 991872 14491892 ~ 14492206 (+)
G33153 NA non-coding upstream 1198062 14285565 ~ 14286016 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding upstream 1323375 14152802 ~ 14160703 (+)
G33093 NA non-coding upstream 1845907 13633702 ~ 13638171 (+)
G33075 LOC104962440 non-coding upstream 2172336 13311414 ~ 13311742 (+)
G33392 NA non-coding downstream 395373 15928569 ~ 15931201 (+)
G33404 NA non-coding downstream 469600 16002796 ~ 16003201 (+)
G33408 NA non-coding downstream 567762 16100958 ~ 16101159 (+)
G33422 NA non-coding downstream 832918 16366114 ~ 16366342 (+)
G33444 NA non-coding downstream 955675 16488871 ~ 16491053 (+)
G33283 NA other upstream 314237 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 997372 14439253 ~ 14486706 (+)
G32539 NA other upstream 5074581 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 5855416 9369898 ~ 9628662 (+)
G32286 NA other upstream 5944867 9261374 ~ 9539211 (+)
AMCG00019345 NA other downstream 21623 15554819 ~ 15626955 (+)
G33406 NA other downstream 510746 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 1916124 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 3471828 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 3752340 19285536 ~ 19294208 (+)

Expression


Co-expression Network