AMCG00019718


Basic Information

Item Value
gene id AMCG00019718
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39033581 ~ 39064073 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019718
aaacaaaacattgaacgGAGCTGTGCAACTAATGGGAGTGTAGAGGGAGAAGAGGAgtgatatatataataaaacatgcagTCGGACAAGaGAAGGACAAAAGAAGACACCTGGAAATctgatgatttaaagagacaTCTTAGGGGAGGAGTGAATGATGATGACAACACAAGGAAGAAACAGGTACAGATGAGAGATGAAGATGTAGTAAAGGGCAGTAGGGAGGAGTCTAGGGATCGGCGAGACAGAGAAAGGGGAAGCACTCGAGAAAGGCCTAAAGAAGGAGACCAAGAGAGGGACAGAAATcaagaaagaagaagagagagagatagggaccGGACAGCAGAAAGGCAGGAGACAGACCGGgacagaaggaaagagagagagaggatgggagACATTGAGAGGAACTCAAACaaggacagggacagagagagtaGGGACAGAAGACATGCAGAAGACAGAGGGACAAAAGGGGAAAGCAAGGAGCTGGAGAGGGacagggaaaggaaaaaagccGAAAGGGAGAGGCAGCAAGGGAAAGAGAGGCATAGGAAAAGTGatgagggaagagagaggggctCGGGAAGAGAAGAGCGAGAGGGTGACCAAACgaaagggagggaaagagagagggacagagacaaagagaaggagcaagagagagaaaatgggcAGCATCACGAGCAGGACCTTGAGAGAAGGAGGGGAAAAGACAGGCACAGACACAAAGATGTGGAGGAAGGCCACAGTGCAAAACCTGTGAGAGGCACAGACAGCTACACTGACAGGCAACGGGAAAAGGAGCTGGAAACCAGGAGAGAAAACGAAAGacgagagagacacagagaccgAGAACATTCTAaacaaagagaagagagagAATTCAGAGAGCTCCGCAGAAGTGACAATGAAGAACGAGACAGGAGGCGCAGAGAAAAAGAGGAAATGAACTATGGGGAGAGCCGCAGACAGGAGGGAGAATCCAGAGACAAGGAGAGGGAACGCAGGCGGAGGGAGTATCGCCTGCAGGAAGACCGggagaagagaaaggaaagaaaggagcATGAAGGCAAATCCAGAAACAAACACCAggagaggagatggagagaggaaaGTCAACCAGAGCAGGGCCAGAAATATACATCCGAAGAACTGCGCCAAGGCCAGACACAGCCCACGGCATGCCACAGAGAGAAACTGCTCCTGGCTGGAGCAGATAACGTGAAGCCAAgtaaggagaggagagaggtgaAAGCAAATAAGGAGATTGAAACAGAAGAATTAGGTATTGAAAAGCTCTCTGCTGAGGACCTGGTTAATGACGAGACAGTGGAAAACTATGAGGAAGACTTTGAAGactatgatgatgattttgAGGATGTGGATGAGGCTGACGACGGAGAAAACAATGATCTGGAGAGCGGTGAAATGAGAGCTGAAATTGAGGCCATCCGAAAAGCTATATCTGTGGAAAACGAATGCATCGGCACTGCACATCATGTAGCAGAGGAGCACAGCCAACACAAACGAGATTCCAGAAGTTCTCAAAGCAGAGGGGCAATTCACAAGGGAAAATATATTGACTTTGTGACAGCAAAGCAACGGGAGGTCAGCAAGAAGGTAGCCAGCAAGCAAAAGAAACGCAGCACAGAGCTGCTTCGGCTAGTTGACCTTGACTTCTCAGTCACCTTTTCCCTACTGGATTTGCCGCCTTTGAATGAATATGACATGTACATCAAAAGCTTTGGCAcgacaaacacaaaacaggttAGTATCAATCTGAAGATGCATCTGAgtCCTAATAGTGAAGAGTCTTTAAACGATTCAGTGAATAAACTGAGTATCGACTCGCAACGACTGTCCAGCTTTTTGCGGTCAGCTTCTCAGGTGATTGCTGTTCTCCTAGAAGAagacagagcagagcagcaTTCCCTTAAGAAGCTGAGATCTGAAGCTGACAGTTTGTCATTTGGTGATGGCTGCTTACAGCTCAATACCAAACTGTCGTTCCTGCATGGTCGCGAGGTGAGCCTGACCAGATTCTCACAAGCCAAGAAGCAGACCTTGCTGTCTGTGCACAGACCGCTGAGTAAGCCCACTGCAGTCTGGCTCGACCATAAGACGGTTGTTTGCATCTGGAACATCTGGGAGCCGTCGTGTCCACAGCAAGTCTTACTCTGCAACTCTGAGATCCGGTGCTGTTGCTTCAGTCCTGGTAATGCCACACTGGTATTTGCTGGCACTGATGATGGCTCTGTGGTCGTGTGGGATCTCCGGGAGCACTCCACTTTACACTACAGTATGAAAATAGGAGACAACGAGTGGACTCTACGCTACCCCACTTTTTCCACTGATGCTGTTCTAGCAACTTCAAGCCATTTCTGCCCAGTGAGGGCTGTGGAACCAGTCCCTGTGATTGCAGCAGAGGGTCACAGTCCAGGATTTTCTCTACTACCAAATCAGGAAGaTTTGCTAGGAATGTCATTTCAGTTGGCATCCCTCGATGAAAACGGACTTCTACATCTATggGTCGTTCTGGAACTTCCAAAAGTGAACCTGGCAGGATCGCAAATGGATTTGGGACTCAAACCAGGGGGAAGATTAAAGCTGCTGCATAGTTCTTCGGTCACTCCTATTGCAAGGTCTCTTCGCCGAGACACCTCACATATAGGCCCGCTGCAGGCCCTGACATTGAAGTTCTTGCCCTCAGATTCCAATCATTTCTTCATTGGCACAGACATGGGTTTAGTGTGCCACGGAACAAGACATGGATTGAAGATACCACCCAAGTTCTACAGGCCACAGCTGTCTGGGCACGCACCGGTGACCGTGACTTCACTGGACCTGTCTCCCTTTGGGGAACCAGTCTTCTTGGTTGGCTGCGTTGATGGGACTATCAGATTACATTCAGTCAGGACCGAATACCCAATCATGGAGTGGAATAGCAGTACTAATGGAGAGCCAATAGTCTCTGTACAGTGGGCTGCCACAAGACCCATGGTCTTCTTTGTGCTGGATGCAGCTTCTAATATCTATGCCTGGGACATGCTGGCAAAGGATTCCCAGCCACTAATCAAGGAAGCCATTCAACCCGATAGggttACTGCCATTGCTGTTTTTGGTGACCCAGGAAAGTCCAATTCCTTTTCAGGAATCTCGCTGGCAAAGCAGTCTGGGAAAATTGAAATTCAGTACTTCAACAAACAGTGGGCAGTGCCTTGCCCTAACGAGTTAGAGAGCCTGCAGAATGTTGTGCTTCAGTCTTGCTAAGATTTATTTGCAGTATTTATATGACACGTGATGGGCCAGATTAGCTCAATTGAGGTGGCAGATGTTAatcaaattaatggaaaaataactttGAGTCTCCACACCCTGATCGGACATCTCCACTTGTAGATGCATTTATGTACCCTGCCTTGTTAGCAAATTGAcacatatctataaatataaatctttaaatTTCAACACTGcacatccatttaaaatgtttagcaTTTTACAGTGTTATCAAAAGTCTAGgtgaatatttaattatcagtataatacatttttatggttACTGTATTTAAAGTGATGTCCATAGCATTTTCa

Function

GO: NA

KEGG:

id description
K22869 WDR60; WD repeat-containing protein 60

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019718 True 3597 mRNA 0.47 21 39033581 39064073

Neighbor

gene id symbol gene type direction distance location
AMCG00019717 NA coding upstream 193201 38838764 ~ 38840380 (+)
AMCG00019710 NA coding upstream 201108 38825792 ~ 38832473 (+)
AMCG00019716 NA coding upstream 261789 38763195 ~ 38771792 (+)
AMCG00019709 NA coding upstream 299844 38662907 ~ 38733737 (+)
AMCG00019699 NA coding upstream 799873 38232175 ~ 38233708 (+)
AMCG00019723 NA coding downstream 253182 39317255 ~ 39328841 (+)
AMCG00019722 LOC105017907,LOC106568825 coding downstream 318074 39382147 ~ 39414885 (+)
AMCG00019728 gtpbp4,LOC107721733 coding downstream 748004 39812077 ~ 39830831 (+)
AMCG00019730 wdr37,LOC102795438 coding downstream 791112 39855185 ~ 39889023 (+)
AMCG00019729 NA coding downstream 849909 39913982 ~ 39919021 (+)
G36370 NA non-coding upstream 175725 38855839 ~ 38857856 (+)
G36189 NA non-coding upstream 1643619 37388328 ~ 37389962 (+)
G36130 NA non-coding upstream 1793087 37238889 ~ 37240494 (+)
G36106 NA non-coding upstream 1972937 37060418 ~ 37060644 (+)
G36098 NA non-coding upstream 2087083 36946101 ~ 36946498 (+)
G36454 NA non-coding downstream 18037 39082110 ~ 39082411 (+)
G36464 LOC103376870 non-coding downstream 193958 39258031 ~ 39258546 (+)
G36497 NA non-coding downstream 328419 39392492 ~ 39430557 (+)
G36516 NA non-coding downstream 642993 39707066 ~ 39709540 (+)
G36585 NA non-coding downstream 1284131 40348204 ~ 40348476 (+)
AMCG00019708 vps41,LOC102790284 other upstream 401403 38578316 ~ 38632178 (+)
G36212 NA other upstream 1517554 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 1820062 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 2734034 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 2969731 36046477 ~ 36063850 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 3492467 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 3560657 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 3896583 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 4197821 43261894 ~ 43271192 (+)
G36954 NA other downstream 4266219 43330292 ~ 43333313 (+)

Expression


Co-expression Network