AMCG00019730 (wdr37,LOC102795438)


Basic Information

Item Value
gene id AMCG00019730
gene name wdr37,LOC102795438
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39855185 ~ 39889023 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019730
ATGCCTGTTGAAAGTGGAAGTACTGCATCTGCCCGGCAAGCAAAGCAGAAGCGCAAGTCTCACAGTCTGTCAATCCGGAGGACAAACAGCACGGAGCAGGACCGCTCAGGAATGCAGAGAGACATGATCGAGGGACAAgATTCCAAACTCCCAGTTTCTCTCCGGAGTAATCTTCTGGACCTGTTTGGGCAGATTGAGCGGGAGTTTGAAAATCTCTACATTGAGAATGTGGAACTGCGCAGAGAAATCGATTCTCTCAATGAGAGGCTGTCGGCTGAAGGACAAACAATCGATGCAGGGGACCTGAGTAAAGGCGCGCTGAAAGCTAAAGCCAGCCACAGTACAAGTCAGCTCTCTCAGAAACTGAAGACCACGTATAAGGCCTCTACAAGCAAgATTGTGTCAAGTTTCAAGACCACAACATCCAGGGCCGTGTGCCAGCTTGTGAAAGAGTACATCGGCCACAGGGATGGCATCTGGGATGTCAGTGTCACCAGGACTCAGCCGGTTGTGTTGGGAACAGCCTCAGCAGATCACACTGCTATGCTCTGGAGTATCGAGACTGGGAAATGCCTTCTAAAGTATGTGGGTCATGCTGGGTCAGTAAACTCCATTAAGTTCCATCCCACAGAGCAAGTAGCTCTTACAGCATCTGGAGACCAGACAGCACACATCTGGAGATTTATGGTGCAACTGCCCACCCCACAGCCAGCCACAGACACCAGTGTCTCTTGCGAGGATGACGTTGACTTTTCAGACAAGGACGAGGCGGACGGGGATGGGGACGTGCTGAGCGAATGTCCCACCATCAGGGTGCCCTCCACCACGCTAAAAAGCCACCAGGGTGTGGTCATTGCTGCCGACTGGCTGGTGGGTGGCAAGCAGGTGGTCACCGCATCCTGGGATAGAGCCGCCAACCTCTACGATGTGGAGACCTCTGAGCTGGTGCACACTCTCACAGGTCATGATCAGGAGCTCACCCACTGCTGCACCCATCCCACACAGCGGCTGGTGGTTACGTCCTCTCGAGACACCACCTTCCGCCTCTGGGACTTCAGGGACCCAAGCATCCACTCTGTCAACGTGTTTCAAGGCCACACTGAGTTGGAGCTGGCAATTCTCAACCTGCAGCACAGAGAAGCAACGGTCCCCGGTGGCGACCCACAATGTCAAGCAGTGCATTTCTTTGGCGTCGTGTCTGCGCTAGAGAACCTGTGCAAGGGAGCCCTGGTGGTGATATTAAGTACAGTGAGCACGCCCGTGTCATTAACGCAGCAGAGTTTAGCCCTAATTAAACCTTAA

Function

symbol description
wdr37 Predicted to be part of preribosome, large subunit precursor. Human ortholog(s) of this gene implicated in neurooculocardiogenitourinary syndrome. Orthologous to human WDR37 (WD repeat domain 37).

NR:

description
PREDICTED: WD repeat-containing protein 37-like isoform X2

GO: NA

KEGG:

id description
K24744 WDR37; WD repeat-containing protein 37

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019730 True 1302 mRNA 0.54 12 39855185 39889023

Neighbor

gene id symbol gene type direction distance location
AMCG00019728 gtpbp4,LOC107721733 coding upstream 24354 39812077 ~ 39830831 (+)
AMCG00019722 LOC105017907,LOC106568825 coding upstream 440300 39382147 ~ 39414885 (+)
AMCG00019723 NA coding upstream 526344 39317255 ~ 39328841 (+)
AMCG00019718 NA coding upstream 791112 39033581 ~ 39064073 (+)
AMCG00019717 NA coding upstream 1014805 38838764 ~ 38840380 (+)
AMCG00019729 NA coding downstream 24959 39913982 ~ 39919021 (+)
AMCG00019733 NA coding downstream 802493 40691516 ~ 40702922 (+)
AMCG00019732 NA coding downstream 829460 40718483 ~ 40729666 (+)
AMCG00019737 LOC107674380 coding downstream 1415811 41304834 ~ 41312913 (+)
AMCG00019735 cdh7,LOC107584702,LOC108432272 coding downstream 1435671 41324694 ~ 41335203 (+)
G36516 NA non-coding upstream 145645 39707066 ~ 39709540 (+)
G36497 NA non-coding upstream 424628 39392492 ~ 39430557 (+)
G36464 LOC103376870 non-coding upstream 596639 39258031 ~ 39258546 (+)
G36454 NA non-coding upstream 772774 39082110 ~ 39082411 (+)
G36370 NA non-coding upstream 997329 38855839 ~ 38857856 (+)
G36585 NA non-coding downstream 459181 40348204 ~ 40348476 (+)
G36586 NA non-coding downstream 480209 40369232 ~ 40369540 (+)
G36588 NA non-coding downstream 492200 40381223 ~ 40381424 (+)
G36597 NA non-coding downstream 565160 40454183 ~ 40454484 (+)
G36598 NA non-coding downstream 600893 40489916 ~ 40490115 (+)
AMCG00019708 vps41,LOC102790284 other upstream 1223007 38578316 ~ 38632178 (+)
G36212 NA other upstream 2339158 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 2641666 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 3555638 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 3791335 36046477 ~ 36063850 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 2667517 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 2735707 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 3071633 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 3372871 43261894 ~ 43271192 (+)
G36954 NA other downstream 3441269 43330292 ~ 43333313 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000070_02612757_02650757 WDR37 coding CI01000070 null 2611087 ~ 2650973 (-)